| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4157 |
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| Symbol | |
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| ID | 5672512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4937187 |
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| End bp | 4938287 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243030 |
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| Product | integrase domain-containing protein |
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| Protein accession | YP_001508447 |
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| Protein GI | 158315939 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.118927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.593362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGCG GGCAGCATGA CGGCGGTGAG ACCGTCCGGC GACAGGTCGG TCCCGGGCCG
GCGCCAGACG TCGTCGACGC GACCGACATG GTGGACGCGG TGGAGATCGT CGCGGCCGGG
CCGGTGGCCG TGCCGGGCAC GGTGGGGCTC GACGGGCCGC TCGCCGGCCG GGTCGGGGAC
TACGCGCGGG CGTCCCGGTC GGCGGCGACC TGGCGTGCCT ACGACGCCGA CCTGCGTCAT
TTCCGGTCCT GGTGCGAGGG ACGTCCCGTA CCGCTGGTCG CCGTGCCCGC CTCCGCGGTG
ACGGTCGCCG GGTACATCAC CGAACTGGCG GACGCCGGGT ATGCGCCGTC GACGATCCGC
CGTCGGCTGG CTGCGATCTC GGTGGCGCAT CAGCTCGCCC ATGCCGAGAA TCCGACGGGG
TCGGCGGAGG TGTCAGCGGT GTGGAACGGG ATCCGCCGGT CGCGGGGGGT GCGCCCGGCG
CGCAAGGCCG CGTTGGACAC GACGTTGCTG TCGCGGGTCG TCGCCGGCCT CGACGACTCG
CAGTTGGCGG ATGTGCGGGA CAGGGCGCTG CTGCTGGTCG GGTTCGCCGG CTGTCTGCGT
CGCAGTGAGC TGGTCGGGTT GGACACCGCC GACCTGGTGG AGACCGACGA CGGGCTGGTC
GTGACGGTGC GCCGTTCCAA GACCGACCAG GAGTCCGCCG GTGCGCAGGT CGGGTTGGCG
TACGGGTCGT ACCGGCCGAC GTGCCCGGTG CGGGCGTGGC GGGGATGGGT GGCGGCCGCG
GCGGCGGCGG GGACGCCGCT GGCTGGCGGG GCGGCGTTTC GGGGGGTGAA CCGGCACGGG
CAGGTCGGCG CGGGCCGGCT CTACCCGGGG TCGGTGGCGC GGATCGTGCA GCGTCGGGTG
GCCGCGGCCG GGTTGGATCC GGCGGATTTC GCGGGGCATT CGCTGCGGTC GGGGTTCGCG
ACGGCGGCGG CGCGGGCCGG GGTGACGGAC CGGTCGATCA TGCGGCAGGG CCGGTGGCGG
TCGGCGGCGT CGTTGGAGTC GTATGTGCGG GCCGGGCGGC TGTTCGACGC GGACAACCCG
TCGGGTCGGG TCGGTCTGTG A
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| Protein sequence | MAGGQHDGGE TVRRQVGPGP APDVVDATDM VDAVEIVAAG PVAVPGTVGL DGPLAGRVGD
YARASRSAAT WRAYDADLRH FRSWCEGRPV PLVAVPASAV TVAGYITELA DAGYAPSTIR
RRLAAISVAH QLAHAENPTG SAEVSAVWNG IRRSRGVRPA RKAALDTTLL SRVVAGLDDS
QLADVRDRAL LLVGFAGCLR RSELVGLDTA DLVETDDGLV VTVRRSKTDQ ESAGAQVGLA
YGSYRPTCPV RAWRGWVAAA AAAGTPLAGG AAFRGVNRHG QVGAGRLYPG SVARIVQRRV
AAAGLDPADF AGHSLRSGFA TAAARAGVTD RSIMRQGRWR SAASLESYVR AGRLFDADNP
SGRVGL
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