Gene Franean1_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4153 
Symbol 
ID5672508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand- 
Start bp4933918 
End bp4934523 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID641243026 
ProductTetR family transcriptional regulator 
Protein accessionYP_001508443 
Protein GI158315935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0444312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.572162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTG CGACCAGGGC GCGGCCCCTG CGTGCCGACG CCCGGGCCAA CTACGAGCGG 
CTGCTGGCAC AGGCACGCCT CGCCTTCGCC GAACACGGCA CCGGGGCGTC CCTGGAAGAC 
ATCGCCCGGC GGGCCTGCGT CGGGACCGGC ACGTTCTACC GCCATTTCCC GTCCCGGGAC 
GCCCTGCTCG AAGCCGTCCT GCACGACCGG TTCGACCGCC TCACCGCGCG AGCCGACGAA 
CTCGCGGCCA CCACGGCCCC CGGCACCGCG CTGACCGTCT GGCTCGGGGA GTTCGTCGAG 
TTCACCAGCG CCTACCGGGG GCTCACCGCC ACGCTGATGC AGACCCTGCG CGACACCTCG 
ACCGAGCTGC ACGCCGCCTG CGCGGCCATG CGCACGGCAG GCTCGACCCT GCTCGCCGGG 
GCGCAGCGCG CCGGGGAAAT CCGCTCCGAC CTGGCCGCCC TCGAACTGTT CACCCTGGTC 
AGCGCCCTCG CCTGGGCATG CGAGCAGACC TCGGCAGCCG TCCCCGACGG TGTCACCGTC 
GACCGGCTGC TGACTCTCAC CCTCGACGGT CTCAGAGCGA CCGACACGGC CCGCCGACCG 
GACTGA
 
Protein sequence
MSGATRARPL RADARANYER LLAQARLAFA EHGTGASLED IARRACVGTG TFYRHFPSRD 
ALLEAVLHDR FDRLTARADE LAATTAPGTA LTVWLGEFVE FTSAYRGLTA TLMQTLRDTS 
TELHAACAAM RTAGSTLLAG AQRAGEIRSD LAALELFTLV SALAWACEQT SAAVPDGVTV 
DRLLTLTLDG LRATDTARRP D