Gene Franean1_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4141 
Symbol 
ID5672498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4922936 
End bp4923757 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content72% 
IMG OID641243016 
Productmethyltransferase type 11 
Protein accessionYP_001508433 
Protein GI158315925 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.160628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACTC TATCGCAGGA GCCTCATCAA CACCGACAGA TGGCCGAGTC GTTCGGCGTG 
GACCCCGAAC GCTACGACCG GGCCCGGCCC CGCTATCCCG ACGCGCTGGT GGAGCGGATC
GTCGCCACCA GCCCCGCCCT CGACGCCCTC GACGTCGGCT GCGGCACCGG CATAGCGGCC
CGGCAGTTCC AGGCGGCCGG CTGTACGGTG CTCGGCGTCG ACCCCGACGC GCGGATGGCC
GAGTTTGCCC GGCGGACCGG GGTCGAGGTC GAGGTCGCCA CATTCGAAGC GTGGGACCCG
GCTGGCCGCG GGTTCGACGC GGTCGTCTCC GGGCAGGCAT GGCACTGGGT GGACCCGGTC
GCGGGCGCAG CCAAGGCGGC GCAGGTTCTG CGGCCCGGCG GCCGACTGGC GGTGTTCGGG
CACGCGTTCG ACGCCCCGCC CGAGGTACAG GAAGCGTTCA CTGCCGTCTA CCGGCGGGTG
GCACCCGACT CGCCGTTGAA CCTCCGGCCA ACGGGCCGTG ACCAGCCGAC AAGGACCGCC
GCGGACATCT ACCAAGCGAT GTTCGCCAAG GCCGCCGACG GCATCCGACA GGCAGGCGGG
TTCGGCGAGC CGGAGCAGTG GCGATTCGAC TGGGAGCAGT CCTACACCCG CGACGAGTGG
CTGGACCATC TGCCCGCCAC CGGCGCCCTC ACCCAGCTCT CGCCGGACAA GCTGGCCGAA
GTGCTGAACT GGGTCGGGGC CGCCATCGAC AAGATCGGGG GCGGCTTCAC CATGCCCTAC
ACCACGCTGG CGGCCACCGC GGCGCGAACC GGCGCCGCCT GA
 
Protein sequence
MPTLSQEPHQ HRQMAESFGV DPERYDRARP RYPDALVERI VATSPALDAL DVGCGTGIAA 
RQFQAAGCTV LGVDPDARMA EFARRTGVEV EVATFEAWDP AGRGFDAVVS GQAWHWVDPV
AGAAKAAQVL RPGGRLAVFG HAFDAPPEVQ EAFTAVYRRV APDSPLNLRP TGRDQPTRTA
ADIYQAMFAK AADGIRQAGG FGEPEQWRFD WEQSYTRDEW LDHLPATGAL TQLSPDKLAE
VLNWVGAAID KIGGGFTMPY TTLAATAART GAA