| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4123 |
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| Symbol | |
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| ID | 5672481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4905158 |
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| End bp | 4906624 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242999 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001508416 |
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| Protein GI | 158315908 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.625658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAAC CTGCCCGCAG AGCCCACCAC CAGGTCACGT TTGCCGTACT GGCGCTCGCC
GTGGCCACCT ACGCCCTGCT GCAGTCACTG GTCACCCCCG TGCTACCCAC GATCATGGAA
AGCCTGCACA CCAACCAGAC CACGGTCACC TGGGTGCTGA CCGCCTACCT CCTCTCCGCC
TCGATCTTCA CCCCGATCAT GGGCCGCATC GGCGACGCCG TCGGCAAGAA GAAAATGCTG
CTGGTCGCCC TCGGCGCACT CGCCGCGGGC TCCGCCCTGG CCGCGATCGC CACCGGCATC
ACCCTGATGA TCATCGCCCG CGTCATCCAG GGTGTGGGCG GCGGCATCCT CCCGCTCGCC
TTCGGCATCA TCCGCGACGA GTTCCCCCTG CCGAAGGTCT CCAGCGCCAT CGGCGTCCTG
GCCGCGCTGA CCGCGGTCGG CGCCGGCCTC GGCCTCGTCC TGGCCGGCCC GATCGTCGAC
CTGCTCGACT ACCACTGGCT GTTCTGGGTT CCCCTGATCA TGGTGCTGCT GGCCGCCGCG
GCCGCCGTCG TGTTCATCCC GGAATCCGCC ATCCGCACCC CCTCCAGGAT CAGCATCACC
CCGGCACTGC TGCTCTCCGC CTGGCTGGTC TGCCTGCTGC TCGGCCTCTC CGAAGGCCCC
GACTGGGGCT GGACGTCCGG CAAGGTGCTC GGCCTGCTCG CCGGCGCCGT CATCATCGGC
GGAGCGTGGG TCGTCGTCGA GACCCGCTCC ACCGCCCCAC TGATCGACAT GACCATGATG
CGCCTGCCGG CCGTCTGGAC CACCAACCTC GTCGCCCTGC TCATCGGCGT CGGCATGTAC
GCCCTCATGG CGTTCCTGCC GCAGTTCGTA CAGACCCCGA CCTCCGCCGG ATACGGCTTC
GGCGCCACCA TCACCGAATC CGGGCTGATC CTGCTGCCGC TGAGCATCAC GATGTTCGCC
GTCGGGATCG CTTCCGGCCC GCTGGCCGCC CGCTACGGAT CCAAGGCCGT CGTCGTCACC
GGCTCCGCGG TCACAATCAT CTCCTTCGTC CTGACCGCCT TCGCCCACCA CGACAAGTGG
GAGGTCTACA TCGCCACCGC GGTGATGGGC ATCGGGCTCG GCCTGGCCTT CTCCGCCATG
GCCAGCCTCA TCGTCGAGGC CGTCCCGGCC CACCAGACCG GCGTCGCCTC CGGCATGAAC
GCCAACATCC GCACCATCGG CGGCTCGATC GGCGCCGCAC TGATGGCCAC CATCGTCACC
TCCGGCGCCG GAGGTGACGG CATACCCAAG GAATCCGGCT ACACCAACGG CTTCGCCATG
CTCGCCGGCG CCACCGTGCT CGCCCTGATC GCCGCCCTCG CCATCCCGGC CGCCCGCCGG
GGCCACCCGG CGACCGCCCA GGACCTGCCA CACGCCGAGC TGGGGCTGGT GCCCGGCGGC
ACCCTGCTCG GCGCCGACCC GGAGTAG
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| Protein sequence | MIQPARRAHH QVTFAVLALA VATYALLQSL VTPVLPTIME SLHTNQTTVT WVLTAYLLSA
SIFTPIMGRI GDAVGKKKML LVALGALAAG SALAAIATGI TLMIIARVIQ GVGGGILPLA
FGIIRDEFPL PKVSSAIGVL AALTAVGAGL GLVLAGPIVD LLDYHWLFWV PLIMVLLAAA
AAVVFIPESA IRTPSRISIT PALLLSAWLV CLLLGLSEGP DWGWTSGKVL GLLAGAVIIG
GAWVVVETRS TAPLIDMTMM RLPAVWTTNL VALLIGVGMY ALMAFLPQFV QTPTSAGYGF
GATITESGLI LLPLSITMFA VGIASGPLAA RYGSKAVVVT GSAVTIISFV LTAFAHHDKW
EVYIATAVMG IGLGLAFSAM ASLIVEAVPA HQTGVASGMN ANIRTIGGSI GAALMATIVT
SGAGGDGIPK ESGYTNGFAM LAGATVLALI AALAIPAARR GHPATAQDLP HAELGLVPGG
TLLGADPE
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