| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4115 |
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| Symbol | |
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| ID | 5672473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4898328 |
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| End bp | 4899734 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242991 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001508408 |
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| Protein GI | 158315900 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.976029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACC GGGGCGTCTC GCCCCCACGA CGCCGCGAGG CGTCCGGACG CGAGGTTCTG
CTGATCGTCT GCAGTGGCGT GATCCTGGCG AGCCTCGACC TGTTCATCGT CAACGTCGCG
CTGCCGCAGA TCGCCCACGA TCTCGGCGAG ACCGACCTGA GCCGGCTGTC GTGGGTGCTC
AACGGCTACG CGGTCGTCTA CGCGGCGCTG CTCGTCTTCT TCGGACGGCT CGCCGACCGG
TACCGCCGCG ACCTCGGCTT CCTGCTCGGC GTCGCGGTGT TCACGCTCGC GTCGGCGGCC
TGCGCGGCGG CCACCACCGT CGACATGCTG ATCGGCTTCC GGCTCGTGCA GGCCGCCGGG
GCCGCGCTGG TGACACCCAC CTCACTGGGC CTGGTGCTCG CGGCCCACGA ACCCGAGCGC
CGTCAGGGCG CCGTGCGCAC CTGGACCGCC GTCGGCGGGA TGTCGGCGGC GATCGGCCCG
GTCGTCGGCG GGCTGCTCGT CGCCGCCAGC TGGCGCTGGG CGTTCCTCGT CAACGTCCCG
GTCGGCCTCG CGGCCCTCGT CGTCGGCTGG CGTCGGCTGC CGCGCCTGGC CGGCCAGCCG
ACCGAGCGGC CCGACGCCGT CGGCGTGCTG CTGGCCACCG GCGGGGTCGG CCTGCTGACC
GCCGGGCTGG TCCGGGGGCC GGACTGGGGC TGGTCCTCGG CGGCGCTGGT GGGATCCCTC
GGCGGCGGGG TCGGCCTGCT CGTCCTGTTC GCCGTCCACT GCGCCACCAG CCGGAACCCG
CTCGTGCACC CGTCCCTGTT CACCTCCCGG CACTTCACCG GCGCCTCGAT CGTCGCGCTG
TTCTTCTCCG CCTCCTTCGG CGCGATGCTG CTGTCGATCG TGCTCTGGGA GCAGGGCCAG
TGGGGATGGT CCGCGCTGCA GGCCGGCCTG GCCATGGCGC CTGGGCCGCT CATGGTCCCG
CTCGTCTCGT TCGGCATCAC CGGCAGGCTG ATCACCCGCT ACGGGCCGGC GATCGTCATC
GGGCTGGGCA GTGTCATCTT CGGCGGCGGG GTCGCCTGGT GGGCGCTCGC GATCACCACG
GAGCCGGACT ACGTCTCCGG CGTGCTCGGC GGCATGGCCC TCACCGGGAT CGGCGTCGGC
CTGACCCTGC CCACCATGAT GTCCACGGCC GCCGCGTCGC TGCCCCCGCA GTCGTTCGCG
ACCGGCTCCG CGGTCGTCAA CATGGTGCGC CAGACCGGCA TCGCCCTGGG CGTCGCCGTC
ACCATCGCGG TGCTCGGCGA GTCGTCGGTG GCCAGCGGCA TCCCGCTGCA CCTGTTCGCC
CGGGTCTGGT GGGTCACCGC CGCCCTGTCG TTCGCCGGAA TCGTGCCCGC CGTGGCCCTC
CTGCGCCGCC CCGCCCGCAC GGCTTGA
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| Protein sequence | MMDRGVSPPR RREASGREVL LIVCSGVILA SLDLFIVNVA LPQIAHDLGE TDLSRLSWVL
NGYAVVYAAL LVFFGRLADR YRRDLGFLLG VAVFTLASAA CAAATTVDML IGFRLVQAAG
AALVTPTSLG LVLAAHEPER RQGAVRTWTA VGGMSAAIGP VVGGLLVAAS WRWAFLVNVP
VGLAALVVGW RRLPRLAGQP TERPDAVGVL LATGGVGLLT AGLVRGPDWG WSSAALVGSL
GGGVGLLVLF AVHCATSRNP LVHPSLFTSR HFTGASIVAL FFSASFGAML LSIVLWEQGQ
WGWSALQAGL AMAPGPLMVP LVSFGITGRL ITRYGPAIVI GLGSVIFGGG VAWWALAITT
EPDYVSGVLG GMALTGIGVG LTLPTMMSTA AASLPPQSFA TGSAVVNMVR QTGIALGVAV
TIAVLGESSV ASGIPLHLFA RVWWVTAALS FAGIVPAVAL LRRPARTA
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