| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4114 |
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| Symbol | |
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| ID | 5672472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4897372 |
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| End bp | 4898133 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242990 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508407 |
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| Protein GI | 158315899 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.893389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAAG CCCCGTCCCG CGTCGCGATC GTCACCGGAG CAGCCCGCGG CATCGGCGCC
GCCATCGCGC AGCGCCTGGC CCGTGACGGC ATGGCGGTGG CCGTGCTCGA CCTCGAGGAG
TCAGCGGCCA AGACCACCGT GGATGCGATC GCGGCCGCGG GCGGGAAGGC GATCGCCCTG
GGTGCCGACG TCTCCGACGC CGCCGCGGTG GACGCGGCCG TCGCCCGGGT GGCCGCCGAG
CTCGGCGCGC CGACGGTGCT GGTCAACAAC GCCGGTATCA CCCGCGACAA CATGCTGTTC
AAGATGACCG AGGGCGACTG GGACGCGGTC ATGGGCGTCC ACCTGCGTGG CTCGTTCCTG
ACCGCCCGGG CCACCCAGAA GTACATGGTG GACGCGAAGT GGGGCCGGAT CGTCAACCTC
TCCAGCATCT CCGCGCTGGG CAACCGCGGC CAGGCGAACT ACTCGGCAGC CAAGGCAGGC
CTGCAGGGGT TCACCAAGAC GCTGGCGATC GAGCTGGGCA AGTTCGGCAT CACGGTGAAC
TGCGTGGCGC CCGGGTTCAT CGTCAGCGAC ATGACGCGGG CGACCGCCGA GCGCCTGGGT
GTCGGCTGGG AGGACTACCT GGCCGTGGCG AAGTCGAAGA TCCCGGTCGC CCGGCCCGGC
GAGGTCGACG ACATCGCCCA TGCGGTGTCG TTCTTCGTCG GCGAGGGCGC CGGCTTCGTG
TCCGGCCAGG TTCTCTACGT CGCCGGCGGC CCGAAGGCCT GA
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| Protein sequence | MSEAPSRVAI VTGAARGIGA AIAQRLARDG MAVAVLDLEE SAAKTTVDAI AAAGGKAIAL
GADVSDAAAV DAAVARVAAE LGAPTVLVNN AGITRDNMLF KMTEGDWDAV MGVHLRGSFL
TARATQKYMV DAKWGRIVNL SSISALGNRG QANYSAAKAG LQGFTKTLAI ELGKFGITVN
CVAPGFIVSD MTRATAERLG VGWEDYLAVA KSKIPVARPG EVDDIAHAVS FFVGEGAGFV
SGQVLYVAGG PKA
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