Gene Franean1_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4111 
Symbol 
ID5672469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4894895 
End bp4896148 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content71% 
IMG OID641242987 
ProductMg2 transporter protein CorA family protein 
Protein accessionYP_001508404 
Protein GI158315896 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG GGCCGGACAG GGGCCGCAGC GAGCTCGCGG AGGAGAACGG CGTGAACGGG 
CACGACCAGG ACGGCACCGG CACCGGCGGA CACCACGGGC ACGGGCACGA CAGCAACGGG
CTCGACGACG GGCTCGACCT CGAGCACGGC GGCGGGTCGC TGCGCGACCT GCTCGCCGGT
GCCCTGGCGC GCCCGGTGTC GCTGGTGCGC ACCCGTCCCA AGCGGCCCCC GACGCCCACC
GCCGAGCAGG TCCGTTCCGG GCAGGTCGTC GCCTGCCACG TCTACGCCGA CGGCCAGCGG
GTCCCCGACG GGTCGAACAT GCTGACCGCC GCGCACATCG CCCGCCGCCG CCATGGCGCG
TTCGCCTGGC TGGGCCTGTT CGAGCCCACC GACTCCGAGC TGGAATCCAT CGCCGGCATC
TACGGCCTGC CCGCGCTCGC CGTGGAGGAC GCCGTCGTCG CCCACCAGCG ACCCAAGATC
GAACGGTACG GCAGCACGCT GTTCGTGGTG CTCAAGACCG CCTGCTACGT CGAGCACGGC
GAGCTGACCG CGGACACCGA GGTCGTCGTC ACCGGCGAGG TGATGGTCTT CATCGGCTCC
GACTTCGTCG TCACCGTCCG CCACGGTGCG CACGGTGGGC TCCAGCAGCT GCGCGGCGAG
CTGGAGGGAC GGCCGGAGAT GCTGCGCCAC GGGCCGTCCG CGGTGCTGCA CGGCGTGTGC
GACCGGGTCG TCGACGACTA CCTGGCGGTC GTCGACCGCA TCGAGGCCGA CGTGGACGCC
GCCGAGGCCT CGGTGTTCGA ACGCTCGGCG CGGCCGTCGG TGGAGAAGCT CTACCAGCTC
AAGCGCGAGA TCCTCGAGTT CAAGCACGCG GTGACCCCGC TGACCGCCCC GCTGCGGTCG
CTGTCCGACA CCCCACTGCC GATGATCGAC CCGCACGTGC GTGACCACTT CCGGGACGTC
TTCGACCATC TCGTGCAGGC CACGCAACGG ATCACCCACC TCGACGAGCT GCTGTCGTCG
ATCCTGCAGG CGACACTGAC GCAGGTGACC ATCGCGCAGA ACGAGGACAT GCGCAAGATC
AGTGCGTGGG TGGCGATCGG GGCCGTGCCC ACCGCGGTCG CCGGGATCTA CGGAATGAAC
TTCGACCACA TGCCCGAGCT GCGGCAGGTC TGGGGCTATC CGGCCGTGCT GGTGACAATC
GCGACTGCCT GCCTGTTCCT GTACCGGGCG TTCCGCCGCA ACGGCTGGCT CTGA
 
Protein sequence
MDAGPDRGRS ELAEENGVNG HDQDGTGTGG HHGHGHDSNG LDDGLDLEHG GGSLRDLLAG 
ALARPVSLVR TRPKRPPTPT AEQVRSGQVV ACHVYADGQR VPDGSNMLTA AHIARRRHGA
FAWLGLFEPT DSELESIAGI YGLPALAVED AVVAHQRPKI ERYGSTLFVV LKTACYVEHG
ELTADTEVVV TGEVMVFIGS DFVVTVRHGA HGGLQQLRGE LEGRPEMLRH GPSAVLHGVC
DRVVDDYLAV VDRIEADVDA AEASVFERSA RPSVEKLYQL KREILEFKHA VTPLTAPLRS
LSDTPLPMID PHVRDHFRDV FDHLVQATQR ITHLDELLSS ILQATLTQVT IAQNEDMRKI
SAWVAIGAVP TAVAGIYGMN FDHMPELRQV WGYPAVLVTI ATACLFLYRA FRRNGWL