Gene Franean1_4101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4101 
Symbol 
ID5672459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4886958 
End bp4887512 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content73% 
IMG OID641242977 
Productflavin reductase domain-containing protein 
Protein accessionYP_001508394 
Protein GI158315886 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACC ACCGCACCGC TCACCCGGCG CACCGCGGCG TACTCGACGC CGACCCGCCC 
GTACGGCGGG CCGCGACGCA GGTCTTCGAC CCCGGGCGGC TGCGGAGCGT CTTCGGTGCC
TTCCCCTCGG GCGTGGCGGC GGTGGCGGCG CTCGTCGACG GCGTGCCGGT GGGGATCGCG
GCAAGCTCGT TCACCTCGGT CTCCCTGGAC CCGCCACTGG TATCGCTGTG CATAGGCCAC
ACGTCCAGTA CCTGGCCCGC ACTGCGCGCC GCGCCGCGGC TCGGGCTGAG CATCCTCAGT
GCCGAGCAGG AGCGGGCGGC CCGCCAGCTC GCGGGCGGGC AGGGCGACCG TTTCGCCGAG
CTGCGCTGGC GGGTGACCGA CGACAGCGCC GTCCTGCTCG ACGGAGCCAG CGCCTGGATC
GAGACCAGCA TCGACCAGCA GGTACGCGCC GGCGACCACG ACATCGTCGT GCTGCGCGTG
CACGACCTGG ACGCCGACCA CGACATCAGC CCGCTGGTGT TCCACGCCAG CCAGTTCCGC
AGGCTCGAAC GCTGA
 
Protein sequence
MTYHRTAHPA HRGVLDADPP VRRAATQVFD PGRLRSVFGA FPSGVAAVAA LVDGVPVGIA 
ASSFTSVSLD PPLVSLCIGH TSSTWPALRA APRLGLSILS AEQERAARQL AGGQGDRFAE
LRWRVTDDSA VLLDGASAWI ETSIDQQVRA GDHDIVVLRV HDLDADHDIS PLVFHASQFR
RLER