Gene Franean1_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4099 
Symbol 
ID5672457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4885168 
End bp4885821 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID641242975 
Productnitroreductase 
Protein accessionYP_001508392 
Protein GI158315884 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA ACCTGTCGCC CGACGAGCTG TTGTCCACCA CCCGGGCGGT GCGCCACCGA 
CTGGACCTGT CCCGGCCGGT GCCGTGGGAG CTCGTCCAGG AATGCGTCGA GCTCGCCGTA
CAGGCCCCGA CGGGCCGCAA CCGGCAGCGG TGGCACTTCG TCGTGGTCAC CGACACGCAG
CGGCGCCGCG CGCTCGCGGA CGTCTTCCGG CGCGCGGTCG CCGCAGCCGA CCCGCACGCC
AGCCCGCTGA CGCAGCGCGA CTCCCAGCGG ATGAACGCCA ACCCGTCGTC GTTGTCCAGG
ATGCGCAGCG GCTTCCAGCA CCTGTACGAC AACATCCACC GGGTGCCCGC GCTCGTGGTC
CCCTGCGTCG AGGGACGAAC CGACCGCGCG TCCGTCCTCG CACAGTCGAT GACCTGGGGC
TCGATCCTGC CGGCCGTGTG GAGTTTCATG CTCGCCGCCC GCGCCCGGGG GTTGGGAACG
GTGTGGACGA CCGCACAGGC GCCCCTCGAA CGCGAGATGG CCACGCTGCT GGGCGTCCCG
TACGACCGGG TGATGCTGGC CGCGTTCATT CCACTCGCCT ACACCGTCGG CACCGAGTTC
CGCCCGGCGC CCCGTGTTCC CCTCGGCGAG GTTCTGCACC GCGACCAGTG GTGA
 
Protein sequence
MLLNLSPDEL LSTTRAVRHR LDLSRPVPWE LVQECVELAV QAPTGRNRQR WHFVVVTDTQ 
RRRALADVFR RAVAAADPHA SPLTQRDSQR MNANPSSLSR MRSGFQHLYD NIHRVPALVV
PCVEGRTDRA SVLAQSMTWG SILPAVWSFM LAARARGLGT VWTTAQAPLE REMATLLGVP
YDRVMLAAFI PLAYTVGTEF RPAPRVPLGE VLHRDQW