Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4099 |
Symbol | |
ID | 5672457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4885168 |
End bp | 4885821 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641242975 |
Product | nitroreductase |
Protein accession | YP_001508392 |
Protein GI | 158315884 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA ACCTGTCGCC CGACGAGCTG TTGTCCACCA CCCGGGCGGT GCGCCACCGA CTGGACCTGT CCCGGCCGGT GCCGTGGGAG CTCGTCCAGG AATGCGTCGA GCTCGCCGTA CAGGCCCCGA CGGGCCGCAA CCGGCAGCGG TGGCACTTCG TCGTGGTCAC CGACACGCAG CGGCGCCGCG CGCTCGCGGA CGTCTTCCGG CGCGCGGTCG CCGCAGCCGA CCCGCACGCC AGCCCGCTGA CGCAGCGCGA CTCCCAGCGG ATGAACGCCA ACCCGTCGTC GTTGTCCAGG ATGCGCAGCG GCTTCCAGCA CCTGTACGAC AACATCCACC GGGTGCCCGC GCTCGTGGTC CCCTGCGTCG AGGGACGAAC CGACCGCGCG TCCGTCCTCG CACAGTCGAT GACCTGGGGC TCGATCCTGC CGGCCGTGTG GAGTTTCATG CTCGCCGCCC GCGCCCGGGG GTTGGGAACG GTGTGGACGA CCGCACAGGC GCCCCTCGAA CGCGAGATGG CCACGCTGCT GGGCGTCCCG TACGACCGGG TGATGCTGGC CGCGTTCATT CCACTCGCCT ACACCGTCGG CACCGAGTTC CGCCCGGCGC CCCGTGTTCC CCTCGGCGAG GTTCTGCACC GCGACCAGTG GTGA
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Protein sequence | MLLNLSPDEL LSTTRAVRHR LDLSRPVPWE LVQECVELAV QAPTGRNRQR WHFVVVTDTQ RRRALADVFR RAVAAADPHA SPLTQRDSQR MNANPSSLSR MRSGFQHLYD NIHRVPALVV PCVEGRTDRA SVLAQSMTWG SILPAVWSFM LAARARGLGT VWTTAQAPLE REMATLLGVP YDRVMLAAFI PLAYTVGTEF RPAPRVPLGE VLHRDQW
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