Gene Franean1_4094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4094 
Symbol 
ID5672452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4878927 
End bp4879541 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content70% 
IMG OID641242970 
ProductTetR family transcriptional regulator 
Protein accessionYP_001508387 
Protein GI158315879 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0325183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAC CGCCCGCGCC CACCGAAGGG GAGAAGAGCA CCCGGGAACG GATCCTCGAC 
GTGGCCCTGG AGCTGTTCAG CACCGCCGGG TACGAAGCGG TGTCGCTGCG CGAGATCGCG
GAGCGGATGA ACTTCACGAA GGCGGCGCTC TACTACCACT TCTCGAGCAA GGACGACATC
CTGCTCGCCC TGCACCTGCG TCTGCACGAT CTCGGCCGGG CGGGCTTCGA CGACCTCGAG
GCGGATCTGG CCCGCCCGGA GCGCTGGCCG CAGCTGCTCG ACCTCGTCGT CAACACCATG
CTGGCGAACC GGTCGCTGTT CCTGTTCCAC ATCCGCAACC ACGGTGCGCT CGAACGGCTG
CACGGCCACA GCCACGACGC CGACCACGCC GACCTGCAGG AGCGGTTCCA GCGGATCCTC
ACCGACGAGA ACGTCCCGGT GGAGCTGCGG GTGCGGCTGA TGTGCGCCCT CGGCGCAATC
GCCGGCGGGT TCGTGCTCGG CGGTGAGGTG CTCGCCGCCG TCCCGGACGC CGACCTCGGC
CGGATGCTGC GCGCCGCCGT CGGTGACCTG ATGTCCCCGG CCGCCGCCCT CGCGCAGCCG
ACCCGTACCT CCTGA
 
Protein sequence
MPRPPAPTEG EKSTRERILD VALELFSTAG YEAVSLREIA ERMNFTKAAL YYHFSSKDDI 
LLALHLRLHD LGRAGFDDLE ADLARPERWP QLLDLVVNTM LANRSLFLFH IRNHGALERL
HGHSHDADHA DLQERFQRIL TDENVPVELR VRLMCALGAI AGGFVLGGEV LAAVPDADLG
RMLRAAVGDL MSPAAALAQP TRTS