| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4092 |
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| Symbol | |
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| ID | 5672450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4877015 |
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| End bp | 4877887 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242968 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001508385 |
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| Protein GI | 158315877 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0130357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGC TCACCGTCGC GACCGGCACC CCCACGCCGA GCGCCCCCGC GACGCCCGCG
GCGCCCGCGC GGTCGGGCTC GATCGGCCAG GCGGTGCGCG ACGTCGTCGT GCTGACCCGC
CGCAACCTCG TCCACGTCGC CCGGGAACCT CTGCAACTGT CCGACGTGAC CATCCAGCCG
GTGCTGTTCA CGCTGCTGTT CGTGTACGTG CTCAGCGGCG GCGTGGCCGT CGGAGGCGGG
GACTACAAGC AGTTCGCGAT CGCCGGGCTG ATCTCGCTGA ACCTCACGAC CGCCTCGATC
GGGACAGCGG TCGGCCTGAG CACGGATCTG GGCAGCGGCG CCGTCGACCG GTTCCGCACC
CTGCCGATCT GGCGGGCCGC CGTCCTCGTC GGCCGGTCGC TGTCCGACCT GCTCTCCTCA
CTGGTGTGCA TGTCGATCGT CGTGCTCACC GGGCTGGCGA TCGGCTGGCG GCCACACACC
TCGCCGGCCC GGTTCGTGGC CGCGCTGGCC GTCCCGCTGC TGTTCAGCTA CGCGCTGGCC
TGGGCGACGG CGTGCCTGGG CATGATCAGT GAGGGGCCGG AGAGCGCGCA GGGGATCGGG
CTGGTGCTGC TGTTCCCACT CGCGTTCGTC TCCAACGCGA TGGTGCCCAC GGCCGGCATG
CCGAGCGCGG TGCGGGCGAT CGCCGAATGG AACCCGGTCA GCGCGGTGAC GGCGGCCGCG
CGGGACCTGT TCGGCAATCC GAACCCCTCG GCCGCCGCGG ACGCCTGGCC GATGCAGCAC
CCGGTGGTCG CCGCCGTGCT CTGGTCGGTG GGGATCGTCG CGGTGTGCGC GCCGCTGGCG
GTCGCCCTCT ACCGGCGCCG CACGACCGAC TAA
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| Protein sequence | MSQLTVATGT PTPSAPATPA APARSGSIGQ AVRDVVVLTR RNLVHVAREP LQLSDVTIQP
VLFTLLFVYV LSGGVAVGGG DYKQFAIAGL ISLNLTTASI GTAVGLSTDL GSGAVDRFRT
LPIWRAAVLV GRSLSDLLSS LVCMSIVVLT GLAIGWRPHT SPARFVAALA VPLLFSYALA
WATACLGMIS EGPESAQGIG LVLLFPLAFV SNAMVPTAGM PSAVRAIAEW NPVSAVTAAA
RDLFGNPNPS AAADAWPMQH PVVAAVLWSV GIVAVCAPLA VALYRRRTTD
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