Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4084 |
Symbol | |
ID | 5672442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4865977 |
End bp | 4866534 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641242960 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001508377 |
Protein GI | 158315869 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0692551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGTCA CCTTAGATGA CAATCACTGG ACGGTACACT TCCGACTCGT GAGCGACGCC CCGGCGGCCC CCTACTCCGC GTCCCTGCCC TTCCTGTTGT CCCAGGTCGG CGCCCGCACG GCGCAGGAGT TCGCCGACCG ACTGGCGCCG CTCGGCGTCT CACCGCGCGC GTTCGGTGTG CTCAGCAACC TGACCACCGC GGCCGCAGGC CGGACCCAGC AGCAGCTCGC GGACGCGCTG GGCATGCACC GCAACAACAT GGTCGGGTTG ATCGACGAGA TGGAGGAGGC GGGCTGGGTC CGGCGGCGGC GCAGCGCACA GGACCGGAGG GCCTTCGAGA TCGACCTGAC GCCGGCCGGC ACGGCGCTCC TGGAGCAGGT CGCGGAGGTG ATCCCACTGC TGGAGGGCAA GATCGCCCGC GATCTGACCG TCGACGAGCG GCGGGTGTTC GTCGGCCTGC TGCGCCGGGT GGCCGCGACG CTGGAGCTGC ACCCGGGGAT CCATCCGCAC CTGGGAGCCC GGCCCCGTTC CACCTGTGCG ACGCCCGAGG ATTCCTAG
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Protein sequence | MIVTLDDNHW TVHFRLVSDA PAAPYSASLP FLLSQVGART AQEFADRLAP LGVSPRAFGV LSNLTTAAAG RTQQQLADAL GMHRNNMVGL IDEMEEAGWV RRRRSAQDRR AFEIDLTPAG TALLEQVAEV IPLLEGKIAR DLTVDERRVF VGLLRRVAAT LELHPGIHPH LGARPRSTCA TPEDS
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