Gene Franean1_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4084 
Symbol 
ID5672442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4865977 
End bp4866534 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content71% 
IMG OID641242960 
ProductMarR family transcriptional regulator 
Protein accessionYP_001508377 
Protein GI158315869 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0692551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTCA CCTTAGATGA CAATCACTGG ACGGTACACT TCCGACTCGT GAGCGACGCC 
CCGGCGGCCC CCTACTCCGC GTCCCTGCCC TTCCTGTTGT CCCAGGTCGG CGCCCGCACG
GCGCAGGAGT TCGCCGACCG ACTGGCGCCG CTCGGCGTCT CACCGCGCGC GTTCGGTGTG
CTCAGCAACC TGACCACCGC GGCCGCAGGC CGGACCCAGC AGCAGCTCGC GGACGCGCTG
GGCATGCACC GCAACAACAT GGTCGGGTTG ATCGACGAGA TGGAGGAGGC GGGCTGGGTC
CGGCGGCGGC GCAGCGCACA GGACCGGAGG GCCTTCGAGA TCGACCTGAC GCCGGCCGGC
ACGGCGCTCC TGGAGCAGGT CGCGGAGGTG ATCCCACTGC TGGAGGGCAA GATCGCCCGC
GATCTGACCG TCGACGAGCG GCGGGTGTTC GTCGGCCTGC TGCGCCGGGT GGCCGCGACG
CTGGAGCTGC ACCCGGGGAT CCATCCGCAC CTGGGAGCCC GGCCCCGTTC CACCTGTGCG
ACGCCCGAGG ATTCCTAG
 
Protein sequence
MIVTLDDNHW TVHFRLVSDA PAAPYSASLP FLLSQVGART AQEFADRLAP LGVSPRAFGV 
LSNLTTAAAG RTQQQLADAL GMHRNNMVGL IDEMEEAGWV RRRRSAQDRR AFEIDLTPAG
TALLEQVAEV IPLLEGKIAR DLTVDERRVF VGLLRRVAAT LELHPGIHPH LGARPRSTCA
TPEDS