Gene Franean1_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4083 
Symbol 
ID5672441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4865589 
End bp4865999 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content72% 
IMG OID641242959 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001508376 
Protein GI158315868 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.176428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGCC CGAGGATTCC TAGGCCGATC ACCGGCCGCC GGTATACCGA TGGGCGGCAC 
AGTTGGCGGT ATGATCGCGG GGTGTCCGCC TCCGTCCCGC TGCGGGAACC GACGTTTCTC
ATTCTCGCCG CGCTGGGGCC CGGGCCGCTG CACGGCTACG GGGTGATCAA GGCCGTCGAG
GAGATGTCCC AGGGGCGTGT CCGGCTCCGC GCGGGCACCC TGTACGGCGC GCTCGAACGC
CTGGAGGCTG ACGGGCTCGT CGCCTTCGAC GGTGAGGTGT CGGACGGCGG CCCGCCACGC
CGCAACTACC GGCTGACCAA CACCGGTGCC GACCTGCTTG CTCAGGAGGC CGCGAGGCTG
CGTGCGAACG CCGACCTGGC CGTGGCCCGG CTCGGGCTGC GCGGCACGTG A
 
Protein sequence
MRRPRIPRPI TGRRYTDGRH SWRYDRGVSA SVPLREPTFL ILAALGPGPL HGYGVIKAVE 
EMSQGRVRLR AGTLYGALER LEADGLVAFD GEVSDGGPPR RNYRLTNTGA DLLAQEAARL
RANADLAVAR LGLRGT