| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4079 |
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| Symbol | |
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| ID | 5672437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4861035 |
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| End bp | 4862447 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242955 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001508372 |
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| Protein GI | 158315864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0276069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCGC GGCAGCGGCT GGCGCTCGTG CTGCTGCTGG GGACGCAGTT CATGCTCGCG
ATCGACTTCT CGATCCTCAA CGTGGCCCTG CCGTCAATCG GGGCGGGGGT CGGCCTCGGT
GAGGGTGACC TGCAGTGGAT CGCGACCACG TTCGCGCTGC CCTCCGCCGG GTTCACCCTG
CTGTTCGCGC GGGTCGCCGA CCTGGCCGGA CGGCGCCGGA TGTTCCTCAC CGGCCTGGTG
CTGCTGATCG TGGCGTCCCT GCTCGGCGGG CTCGCCCAGG GGCCGACCGT GCTGCTGCTC
GCCCGCGTCG GCCAGGGCCT CGCCGCCGCG ATCGCCATCC CGGCCGCGCT GTCCCTGCTG
GTCACGACGT TCCCGGAGGG CCCCGTCCGG CAGCGTGCGC TCAGCCTCAA CGGTGCGCTG
CTGCCCGCCG GCTTCACCGT GGGCGCGCTG GTGGGCGGGC TGCTGACCGG CTATCTCAGC
TGGCGCTGGG CCTTCCTCGT CAACGTTCCG GTGGCGCTGG CGATCCTGCT CGCCGCGCCG
CGGGTCGTCC CCGGTGGCCG CGCGGACGTC CGCCAGCGGC TCGACGTCCC CGGTGCGCTG
ACCGTCACCG CCGGGCTGGT CGCCTTCGTC TACGGCATCT CCAGCGGCGG TGAGGACGGA
TGGGGCCGGC CGTCGGTGTG GATCGCGGTG GCCGCGGGGC TCGTCCTGCT CGGCGCCTTC
TGGCGGATAG AGGCGACCAG CCCGCATCCG CTGGCCTCGC TGGAGGTGCT GCGGCTGCGC
CACGTCGGAT GGGGCAACCT CGGCGGGCTC GTGGTCTTCG CGATGGGCAG CTCGATCGTG
TTCCTGATGA CGCTGTACCT GCAGCGGGTC CTCGGCTACT CGGCGGTGAC GACCGGGCTG
ATCTTCGGGC TGCCCGGGAC GGCCGCGTTC GTGGCCGGAC TGGTGGCACC GCGCGTCCTG
GCCGTCGTGG AACCACGCCG CACCCTGGTG CTCGGGCTGC TCGTCCAGGG CCTGTCCGCG
CTGGCCCTGG CCTTCGTCGG GCTGGACCGC AGCTCGCTGT CGCTCGTGCT GGCGGCGTCC
GTCGTCGGAT TCTTCGGCCA CGCCAGCGGG CTCGTCGCCT ACCTGGTGAC GGCGACCTCC
GGGCTGCCCG ACACCCAGCA GGGCCTGGCC ACCGGCCTGA CGACGATGAC CCAGCAGGTG
GCACTCACAC TGGGCATACC GATCATGAGC GCGGTGGCGA CCGCCCGGAC GTCCGCGCTC
ACCGCGGGTG GCGACCACTC GGCGCGGGAG GCGACGCTGG GCGGCATCCA GACCGCGCTG
GTCGTGAACG GGCTCGTCAC GATCGCCCTG GCCGCACTGA TCGCGACCGT CCTGCTCCGC
CGCCGCCCGG GCCTCAGGAC AGCTGTGGTG TAG
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| Protein sequence | MTPRQRLALV LLLGTQFMLA IDFSILNVAL PSIGAGVGLG EGDLQWIATT FALPSAGFTL
LFARVADLAG RRRMFLTGLV LLIVASLLGG LAQGPTVLLL ARVGQGLAAA IAIPAALSLL
VTTFPEGPVR QRALSLNGAL LPAGFTVGAL VGGLLTGYLS WRWAFLVNVP VALAILLAAP
RVVPGGRADV RQRLDVPGAL TVTAGLVAFV YGISSGGEDG WGRPSVWIAV AAGLVLLGAF
WRIEATSPHP LASLEVLRLR HVGWGNLGGL VVFAMGSSIV FLMTLYLQRV LGYSAVTTGL
IFGLPGTAAF VAGLVAPRVL AVVEPRRTLV LGLLVQGLSA LALAFVGLDR SSLSLVLAAS
VVGFFGHASG LVAYLVTATS GLPDTQQGLA TGLTTMTQQV ALTLGIPIMS AVATARTSAL
TAGGDHSARE ATLGGIQTAL VVNGLVTIAL AALIATVLLR RRPGLRTAVV
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