Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4077 |
Symbol | |
ID | 5672435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4859261 |
End bp | 4859770 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641242953 |
Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
Protein accession | YP_001508370 |
Protein GI | 158315862 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03618] PPOX class probable F420-dependent enzyme |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000359067 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCCCGT TCGACCCCCC GCACAACTCC GCCGCTCCCG ACGGGGCCGC CTTTGACAGG GCCGCTTTCG AGGCGGCAGC CGAGCTGGGG CGCGCGGAGA GCGGGCTGGC CGTGATCTCC ACCAGCCGCG CCGACGGGAG CATCCAGGCC TCCGTGGTGA ACGCCGCCTT CATGCCCCAT CCGCTGCCGC CCGATCCGCG GGAGCCCGCG CCGGTCGTGG CCTTCGTGAC CTACGGTCGG ACGAAGCTGG CCAACCTGCG CCGCCGGCCG CGGGTCAGCG CGACGTTCCG GGCCGGGTGG CGGTGGGCCA CCGTGGAGGG CACGGCGGAG ATCGTCGGGC CCGACGACCC CCACGACCAG GTCGACGCTG AGCGTCTCCG GCTGCTGCTG CGGGAGATCT TCACCGCCGC CGGTGGCACC CACGACGACT GGGACACCTA CGACCGGGTG ATGGCCGAAC AGCGCCGCGC CGCCGTCCTC ATCCACCCGA CCAGGGCCTA CGGCCCCTGA
|
Protein sequence | MAPFDPPHNS AAPDGAAFDR AAFEAAAELG RAESGLAVIS TSRADGSIQA SVVNAAFMPH PLPPDPREPA PVVAFVTYGR TKLANLRRRP RVSATFRAGW RWATVEGTAE IVGPDDPHDQ VDAERLRLLL REIFTAAGGT HDDWDTYDRV MAEQRRAAVL IHPTRAYGP
|
| |