| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4071 |
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| Symbol | |
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| ID | 5672429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4853713 |
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| End bp | 4854954 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641242947 |
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| Product | homocitrate synthase |
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| Protein accession | YP_001508364 |
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| Protein GI | 158315856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00164533 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCG GCACGTCGTC CTGCCCGCCC GCGCCGCGCC CCGTCCCGCC GGATCACGCG
CGGGAGAACG GGTCCGGGCC GGAACCCGGG CCTGGCCCCG GTCCGGTCCG GTTCTGCGAC
ACCACCCTGC GTGACGGCGA GCAGACCCCG GGGGTCGCCT TCACCGCCAA GGAGAAGATC
GCCATCGCGG TCGCGCTCGA CGCCGCCGGC GTGCACCAGA TCGAGGCCGG GGTGCCGGCG
ATGGGGCCGG TCGAGGTGGA TGTCCTGCGC CGCGTCGTCG CGGCGGTCGA GCGGGCCGGC
GTGGTCGCCT GGTGCCGCGC GGACCGCCGC GACGTCGACG CCGCCGTCGC CAGCGGGGTC
GACGCCGCGC ACCTGACCAT CCCCGCCTCC GACCTTCACC TGCGCACCAA GCTCGGCAAG
GACCGGGCCT GGGCGCGGGC CCGCATCCGC GACTGCGTCC TCGACGCCAC CGACCGCGGC
CTGCGGGTGA GCGTCGGCTT CGAGGACGCC TCCCGCGCGG ACGACGGCTT CGTCATCGAC
CTGGCCGGGG AGCTACGGCG CCTCGGCGTC ACCCGGTTCC GCTGGGCGGA CACGGTCGGG
GTGGCCAATC CGATCACCCT GCACACGCGG CTGCGAGCGC TGCTCGACGC CGTCCCCGGG
CCGTGGGAGA TCCACGCCCA CGACGACTTC GGGCTGGCGA CCGCCAACAC GATCGCCGCG
GTGCAGGCCG GGTTCACCTG GGTGAGCACC ACGGTGGCCG GCCTGGGCGA GCGTGCCGGC
AACGCGCCGA CCGAGGAGGT CGCGATGGCG CTGCGGCACC TGCTCGGCCT GCCCGTCGAC
CTGGACACCG CCGCGTTCCG CCCGCTGGCG CGGCTGGTCG CCGGCGCGTC GCGCCGGCCG
GTTCCCGCCG GCAAGGCCGT GGTCGGCGAC GCCGTGTTCG ACCACGAGTC CGGCATCCAC
GTGCACGGCG TGCTGCGCGC CCCGGCGACC TACGAGCCGT TCGACCCGGC GGAGGTCGGC
GCGCGCCGGC GGCTGGTGCT GGGCAAGCAC AGCGGCCGCG CCGCCGTGCG GCACGCGATG
GACCGGCACG GCATCGACGC GCCCGACGAG GACCTGGAAC CGATCGTCGG CCTGGTCCGC
GCGCACGCCA CCGTGTACAA GCAGCCGCTG AGTTCCGACC AGCTGCGGGC GATGGCCCGG
CGGGTCGCCA CCCGCCGCGG CGCACGGCCC CGCCGCGGCT GA
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| Protein sequence | MKSGTSSCPP APRPVPPDHA RENGSGPEPG PGPGPVRFCD TTLRDGEQTP GVAFTAKEKI
AIAVALDAAG VHQIEAGVPA MGPVEVDVLR RVVAAVERAG VVAWCRADRR DVDAAVASGV
DAAHLTIPAS DLHLRTKLGK DRAWARARIR DCVLDATDRG LRVSVGFEDA SRADDGFVID
LAGELRRLGV TRFRWADTVG VANPITLHTR LRALLDAVPG PWEIHAHDDF GLATANTIAA
VQAGFTWVST TVAGLGERAG NAPTEEVAMA LRHLLGLPVD LDTAAFRPLA RLVAGASRRP
VPAGKAVVGD AVFDHESGIH VHGVLRAPAT YEPFDPAEVG ARRRLVLGKH SGRAAVRHAM
DRHGIDAPDE DLEPIVGLVR AHATVYKQPL SSDQLRAMAR RVATRRGARP RRG
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