| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4053 |
|---|
| Symbol | |
|---|
| ID | 5672411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4832769 |
|---|
| End bp | 4834154 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641242929 |
|---|
| Product | ferredoxin--NADP(+) reductase |
|---|
| Protein accession | YP_001508346 |
|---|
| Protein GI | 158315838 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.172833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGG GAGCTGCGGC CGCGCCGTTG ACCGTCGCGG TGGTCGGATC CGGTCCGTCG
GGCTTCTACG CGGCGGCCTC GCTGCTGGAA CAGCACGACG TACCGGTCCG GGTGGACATG
TACGAGCGGC TGGCCACGCC GTGGGGCCTG GTGCGTTCCG GAGTCGCCCC CGATCATCCG
AAGATAAAGG CGGTGTCCAG CGTGTACGCG GCGATCGCCG CGCACGAGAA CTTCCGCTTC
TTCGGCAATG TGGACGTCGG CAAGGACGTC ACGCGTGAGG AGCTGACCGC GCGCTACGAC
GCCGTCCTGT ACGCCGTCGG CGCGCAGACG GACCGGCGCC TCGGGATCCC CGGTGAGGAC
CTGCCCGGCA GCGAGTCCGC GGTCGACTTC GTCGGCTGGT ACAACGGGCA CCCCGACTAC
GCGCACCTCA CCTTCGACCT CAGCGGCGAG CGCGGGGTCG TGATCGGCGC CGGCAACGTC
GCCCTCGACG TCGCCCGCAT CCTCTGCTCG CCGCACGAGC GGCTGTCCCG CACCGACATC
GCCGACCACG CCCTCGACGC ACTGCGCGCC TGCGCGCTCA AGGAGGTCCT GGTCGTCGGG
CGCCGCGGCG CCGCGCAGGC GGCCTTCACG ACCGCGGAAC TCAAGGAGCT GCCCGAGTTC
ACCGAGTCCG GGGTGGACGT CGACCCGGCC GAGGTCGCCG AGCAGGAGGG CGAGGAGGCG
CTGTCCCGCC TGGTCAAGCG CAACCTGGCG GTGATGCGCG GGTACGCGCA GAACCCGGTG
CCCGCGGGCG CGCGCCGGGT GGCGCTGCGC TTCCAGCGCA CCCCGCTGGA GATCCGCGGA
GACGGCCGGG TCGAGGAGAT CGTGTTCGCC CGCAATGCGC TGAAGGTCGG CGACGACGGC
TGGGTCAGCG CCGTCGACAC CGGTGAGCGG GAGACCGTCC CGACCAGCCT GGTGCTGCGC
GCCGTCGGCT ACAAGGGCCG GTCGATCGAG GGGCTGCCGT TCGACGACCG CCGCGGGGTC
ATCCCGAATG TGAACGGGCG GGTCGAGGGC GTCGAGCGCG AGTACGTGGC CGGCTGGATC
AAGCGCGGCC CGACCGGGAT CATCGGCACG AACAAGAAGT GCGCCGGCGA GACCGTCGCG
CGGCTGCTCG CGGACGTCGC CGACGGCACG CTGCGCCGCC ACGACCGGGG CGCCGCGTTC
GACCCGGTCG GTGAGATCGA CACCTGGCTG CGCGGCCGCC AGCCGCACCT CGTCACCGAG
GAGGGCTGGC GGCTGATCGA CTCCGTCGAG CGCTCCTCGG GGGAGTCCGC CGGCCGGCCG
CGTGTCAAGC GCGTCCTCAC CGACGAGCTG CTCGACATCG CGCTGGAGCG CCGGATCGCC
TCGTGA
|
|---|
| Protein sequence | MPQGAAAAPL TVAVVGSGPS GFYAAASLLE QHDVPVRVDM YERLATPWGL VRSGVAPDHP
KIKAVSSVYA AIAAHENFRF FGNVDVGKDV TREELTARYD AVLYAVGAQT DRRLGIPGED
LPGSESAVDF VGWYNGHPDY AHLTFDLSGE RGVVIGAGNV ALDVARILCS PHERLSRTDI
ADHALDALRA CALKEVLVVG RRGAAQAAFT TAELKELPEF TESGVDVDPA EVAEQEGEEA
LSRLVKRNLA VMRGYAQNPV PAGARRVALR FQRTPLEIRG DGRVEEIVFA RNALKVGDDG
WVSAVDTGER ETVPTSLVLR AVGYKGRSIE GLPFDDRRGV IPNVNGRVEG VEREYVAGWI
KRGPTGIIGT NKKCAGETVA RLLADVADGT LRRHDRGAAF DPVGEIDTWL RGRQPHLVTE
EGWRLIDSVE RSSGESAGRP RVKRVLTDEL LDIALERRIA S
|
|---|
| |