| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4043 |
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| Symbol | |
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| ID | 5672401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4821414 |
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| End bp | 4822100 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242919 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001508336 |
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| Protein GI | 158315828 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.168546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGACGG CCGCGCCGGT TGATCGCGAG AAGCCGAACG GGCCTCGCTC GCGCAAGGGC
GCCGCGACGC GCGCACGGCT GCTCGACGCG GCCAAGGCCG TCTTCGAGAA GGACGGTTTC
CTCGAGGCCC GGATCTCGGA CATCGCCGAG CAGGCCGGGC TTTCCCACGG GTCGTTCTAC
CACTACTTCG ACTCCAAGGA GCAGATCTTC CGCGAGGTCG CCATGGAGAT GACGGACTTG
CTGAACGCTC CGCTGAGCAC GTCGATCTTC CTGCCGTCCT CGACCGCGGT CCCCCGGGAG
CGGATCAGGG CGGGCATCCG CACCTACCTC GAGAGCTACC GCGCGGAGGC GCGGATCATC
GGGGTGATCG AGCAGGTGTC CCGCTACGAC GCCCATCTCA CCGACGAGCG GTTCGAGCAC
CAGCAGCGCG ACCGGGAGCG CGTCGTCGGC TCGATCCGGC AGCTACAGCT CCTCGGCCTG
GCGGATCCGG ACGTCGACCC CGCGATCGCC GCGCACGCGC TCGGCGCGAT GGTCTCCCGG
TTCGCCGAGA TGTGGTTCGT TCAGGGGTTG GTCGACTGCG ACTTCGACGA GGCCACCGAC
CAGCTCGCCA GACTTTTCGC GAGCGCGCTG CGGCTGCGCG ACCGGCCGGA CGAGGACGGC
CGGCCCTCCC CCGCTTCCGC AAAGTAA
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| Protein sequence | MSTAAPVDRE KPNGPRSRKG AATRARLLDA AKAVFEKDGF LEARISDIAE QAGLSHGSFY
HYFDSKEQIF REVAMEMTDL LNAPLSTSIF LPSSTAVPRE RIRAGIRTYL ESYRAEARII
GVIEQVSRYD AHLTDERFEH QQRDRERVVG SIRQLQLLGL ADPDVDPAIA AHALGAMVSR
FAEMWFVQGL VDCDFDEATD QLARLFASAL RLRDRPDEDG RPSPASAK
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