| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4035 |
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| Symbol | |
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| ID | 5672393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4811306 |
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| End bp | 4812079 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242911 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508328 |
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| Protein GI | 158315820 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.178927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACCTGA ACGGACGTTC AGCGATAGTG ACGGGCGGTG CCGGCGGCCT CGGCGCCGCG
ACGGTGCGGC ACCTGGCCGA GGTCGGCATG CACGTCGTGA TCTTCGATCA GGACGGCGCG
GCCGCAGCAA CCCTGGCCAA GGAGCTCGGT GACTCGACCT CCGCCGTCGG TGGTGACGTC
AACAACGACG AGGACGTGCA GGCCGCGATC GGGGCCGCGC AGGCGGGTGG CCCGCTGTCC
GTCGTCGCGA ACGTGGCCGG CGGTGGCGTC AAGGGCGCCG GGCGCACCGT CGGGCGGGAC
GCGACGCCGC ACGACAAGCC GGCGTTCATC AAGACCATGG AGATGAACGC GTTCGGCACC
TTCAACGTGA CCCGGCTGTC CGCCGCCGCG ATGGCCGGCA ACGAGCCGGA CGCGGACGGT
GCGCGGGGGG TCGTGGTGAA CACGGCCTCG ATCGCCGGGA TCGAGGGCCA GATCGGCCAG
GTCTCCTACA GCGCGGCCAA GGCGGCCATC CTCGGCATGA CCCTGCCGAT GGCCCGTGAC
CTGGCCCCGA TCGGCGTGCG GGTCTGCGCC ATCGCGCCGG GGACCATGGG GACCCCGCGG
ATGATGGGCG TGCCGGAGCA GATGCGGGAG AAGTTCGTCC AGGACATCAT CTTCCCGCGC
CGGCTCGGCA AGCCCGAGGA GTTCGCGCTG CTGGTCGAGT CGATCGCCCG CAACTCCTAT
CTCAATGGCG AGAACATCCG CCTCGACGGC GCTCTGCGCT TCGGCCCCCG GTAG
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| Protein sequence | MDLNGRSAIV TGGAGGLGAA TVRHLAEVGM HVVIFDQDGA AAATLAKELG DSTSAVGGDV
NNDEDVQAAI GAAQAGGPLS VVANVAGGGV KGAGRTVGRD ATPHDKPAFI KTMEMNAFGT
FNVTRLSAAA MAGNEPDADG ARGVVVNTAS IAGIEGQIGQ VSYSAAKAAI LGMTLPMARD
LAPIGVRVCA IAPGTMGTPR MMGVPEQMRE KFVQDIIFPR RLGKPEEFAL LVESIARNSY
LNGENIRLDG ALRFGPR
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