Gene Franean1_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4032 
Symbol 
ID5672390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4808061 
End bp4808633 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content66% 
IMG OID641242908 
Productdehydratase 
Protein accessionYP_001508325 
Protein GI158315817 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.962919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.662767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTGG TGTACGTGGA CGGATCCGCC CGCCAGGGGC GCTCGCGGGA AGGAACAGGG 
GTCGTCATGC AGTTTGGCCG GTACTACGAG GAGTTCGAGG TCGGTGCGGT CTACAGGCAC
TGGCCTGGCA AGACGGTCAC CGAGTACGAC GACCATCTGT TCTGCCTGCT CACGATGAAC
CACCACCCGC TGCACCTGGA CGCCAACTAC GCCGAGCACA CCACCCAGTT CAAGCGCAAC
GTGGTCGTCG GGAACTACGT CTACTCGCTG CTGCTCGGGA TGTCCGTCGC TGACGTTTCC
GGCAAGGCGA TCGCCAACCT GGAGGTCGAG TCGCTGCGGC ACGTGGCGCC GGTCTTTCAC
GGGGACACGA TCTACGGTGA GTCGACGGTG CTGGACAAGG TGGAGTCGAA GAGCAAGGAC
GACCGCGGCA TCGTGACGGT CGAGACCCGC GGCCTCAACC AGGACGGCAC CCTGGTCTGC
ATCTACCGGC GCAAGGTGAT GGTCCCCAAG CGGTCCTACG GCGAGGCCCG CGGGGGAGAA
CAGCCCGGCC GGCCCGAGCC CCGGGCCTCC TGA
 
Protein sequence
MRVVYVDGSA RQGRSREGTG VVMQFGRYYE EFEVGAVYRH WPGKTVTEYD DHLFCLLTMN 
HHPLHLDANY AEHTTQFKRN VVVGNYVYSL LLGMSVADVS GKAIANLEVE SLRHVAPVFH
GDTIYGESTV LDKVESKSKD DRGIVTVETR GLNQDGTLVC IYRRKVMVPK RSYGEARGGE
QPGRPEPRAS