Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4032 |
Symbol | |
ID | 5672390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4808061 |
End bp | 4808633 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641242908 |
Product | dehydratase |
Protein accession | YP_001508325 |
Protein GI | 158315817 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.962919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.662767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGTGG TGTACGTGGA CGGATCCGCC CGCCAGGGGC GCTCGCGGGA AGGAACAGGG GTCGTCATGC AGTTTGGCCG GTACTACGAG GAGTTCGAGG TCGGTGCGGT CTACAGGCAC TGGCCTGGCA AGACGGTCAC CGAGTACGAC GACCATCTGT TCTGCCTGCT CACGATGAAC CACCACCCGC TGCACCTGGA CGCCAACTAC GCCGAGCACA CCACCCAGTT CAAGCGCAAC GTGGTCGTCG GGAACTACGT CTACTCGCTG CTGCTCGGGA TGTCCGTCGC TGACGTTTCC GGCAAGGCGA TCGCCAACCT GGAGGTCGAG TCGCTGCGGC ACGTGGCGCC GGTCTTTCAC GGGGACACGA TCTACGGTGA GTCGACGGTG CTGGACAAGG TGGAGTCGAA GAGCAAGGAC GACCGCGGCA TCGTGACGGT CGAGACCCGC GGCCTCAACC AGGACGGCAC CCTGGTCTGC ATCTACCGGC GCAAGGTGAT GGTCCCCAAG CGGTCCTACG GCGAGGCCCG CGGGGGAGAA CAGCCCGGCC GGCCCGAGCC CCGGGCCTCC TGA
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Protein sequence | MRVVYVDGSA RQGRSREGTG VVMQFGRYYE EFEVGAVYRH WPGKTVTEYD DHLFCLLTMN HHPLHLDANY AEHTTQFKRN VVVGNYVYSL LLGMSVADVS GKAIANLEVE SLRHVAPVFH GDTIYGESTV LDKVESKSKD DRGIVTVETR GLNQDGTLVC IYRRKVMVPK RSYGEARGGE QPGRPEPRAS
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