Gene Franean1_3978 details

Gene Information

• Locus tag: Franean1_3978
• ID: 5672339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. EAN1pec
• Kingdom: Bacteria
• Replicon accession: NC_009921
• Strand: +
• Start bp: 4764625
• End bp: 4765374
• Gene Length: 750 bp
• Protein Length: 249 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641242857
• Product: hypothetical protein
• Protein accession: YP_001508274
• Protein GI: 158315766

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.455038
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.388652
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACGGAAG CGCTGAGCGC CGGGGAGGAC ATCCGGCTCA CCGTGCCTCT CTACAGCCTC 
GCCGAGGCCG CACGGTGTCT GGCTCTACGG CCGACGACTT TCGGCAGGTG GGCACGGGGC 
TACACCTGGG TCACCCAGGG CGGCCGGCAG GTGCGCAGGA GCCCGGTGGT CACGGCGTTG 
CCAGCACCGT TCCGCGGGGG GCCGTCGGTG CCGTTCATCG GCCTGGCGGA AGGGCTGGTG 
CTTGCCGCGT TCCGCCAGGC GCATGTCCCT TTGCAGCAGA TCAGGCCGGC GTTGGAGTTC 
CTGCGCGACG AGGTCGGCCT GGACCACGCG CTGGCCAGCC GCCGCCTCTA CCTGGCCGGG 
GCGGAGCTGC TGTGGGACTA CGCCCAGCAC GACGACGCCG ACCCGCGCGC CGCCCGCGGT 
GTCCGTGAGC TGGTTGCCAT CCGCAGCGGC CAACGGGTCT TCGCCGAGGT CGTCGACCGT 
TACCTGCGCC TGATCACCTA CGCCGACGAC GACCTGGCCG AGCACATCCA GCTTCCCGGC 
TACGAGACCG CGATCCTCGC CTCGGGTGCA CGCTGCTTCG CCCTCGCACG ACAGGACCTC 
ACTGGCTGTC AGATGGCTCA ACGTCTCATC GACAACAGGG AGGAGATCCT CCGCGTCGCG 
CGCTCCCGAC CTGGGCCGTA TTTCTTCCAC GTCCACCAGG ATCGCGTCGA TGAGATGCCT 
CTCGTCTCCA GGAGACCGGC GAACGGGTAG 

 

Protein sequence

MTEALSAGED IRLTVPLYSL AEAARCLALR PTTFGRWARG YTWVTQGGRQ VRRSPVVTAL 
PAPFRGGPSV PFIGLAEGLV LAAFRQAHVP LQQIRPALEF LRDEVGLDHA LASRRLYLAG 
AELLWDYAQH DDADPRAARG VRELVAIRSG QRVFAEVVDR YLRLITYADD DLAEHIQLPG 
YETAILASGA RCFALARQDL TGCQMAQRLI DNREEILRVA RSRPGPYFFH VHQDRVDEMP 
LVSRRPANG