Gene Franean1_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3966 
Symbol 
ID5672327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4749554 
End bp4750342 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID641242845 
Producthypothetical protein 
Protein accessionYP_001508262 
Protein GI158315754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0575992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCT ACGACGTCTT CCGCCGATAC GAGCGCCACG TGTGGCGGCT CGCCGACATC 
CCCTTCGACG AGGTGCGGCC CGAGCTCGTC CGCCCCGAGT ATGTCCGGAT CGCGCGCGGC
GCGGTGATGG GCGAGGCGAA CTCGATCGCC GCCCAGCACG GCTTCTTCGA CGAGTTCGTC
GACGACTACG ACTTCTCCGC GTTCATCGCG CTGTGGGGCG GGCAGGAGCT CCAGCACCAC
TTCGCGTTCC GGGCCTGGCT GGACCAGATC GACGCCCAGG TGGAGCCGGG CGCGGTCGCG
GCGATGCGGG AGCCCTACGC GCCGGGCACC ACCCCGGCGG CGACCCTGGC GACCAACGTC
ATCTCCGAGC TGACGGTCAA CCACGTCTAC CGCGCGGTCG CCGCCTGGGT GGAGGAGCCG
GTGCTGGCCG CCATCATGAC GAAGGCGAGC CTGGACGAGG CCGCGCACGC CCGCGAGTTC
ATCCACTACA CCCGGTGCCG GCTCGCCGAG CACCCGGACG AGCTGGCGTC CGTGCTGGAG
ACCCTGTTCG TCTACACCGC CGAGCAGCGC ATCAAGCACC CGGTCGGCGT CTTCAAGGGC
GAGCTGGAGG CCCTGCGCGA CCACGACACC ATCGACACCG GGTTCACCTA CTTCCTCACC
CAGGTGGCGA CCGAGGGCGA GCTGGCCCAC CTGCAGGACA AGATCCGGCG GGCCTTCGGC
TCACTGACAG GCCTGGACCT GACCACCAAC GCCCGGGTCC GCCGCAACCT CGCCGAGGCG
CTCGGATGA
 
Protein sequence
MHSYDVFRRY ERHVWRLADI PFDEVRPELV RPEYVRIARG AVMGEANSIA AQHGFFDEFV 
DDYDFSAFIA LWGGQELQHH FAFRAWLDQI DAQVEPGAVA AMREPYAPGT TPAATLATNV
ISELTVNHVY RAVAAWVEEP VLAAIMTKAS LDEAAHAREF IHYTRCRLAE HPDELASVLE
TLFVYTAEQR IKHPVGVFKG ELEALRDHDT IDTGFTYFLT QVATEGELAH LQDKIRRAFG
SLTGLDLTTN ARVRRNLAEA LG