| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3960 |
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| Symbol | |
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| ID | 5672321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4741066 |
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| End bp | 4742973 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242839 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001508256 |
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| Protein GI | 158315748 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.522834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0456544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAGT ACACCCTGGG AGCGGGCCGG GTCCTTCCTG ACGACCGCGG TCTTTATTCC
CTCGTCGACG ACCGCGTCCG TACCGATCCG GACCGGGTGA TCCTCAGCCG GCCCACCGGG
ACGGACTGGC ACGACGTCAC CTTCCGCGAG CTCGACGCCC ACGTGCGCCG GGTCGCCGCG
GTGCTCCTCG GCCACGGGGT GGGCGTGGGC GACCGCGTCG GCATCGTCGG CCGCACCAGC
TACGAGTGGG TGGTCGCCGA CCTCGCGGTC CTCGCCCTCG GCGCGATCAC CGTGCCGATC
TTCCCGACCG CCTCGCCGGC GCAGATCACC CACATCGTGA CCGACTCCGG CATGGCGTGG
TGCTTCGTCG AGACCCCGGA GCACCACAGC GCGGTCGCCA CGGCCGGCGC CGGGACGCTG
CTCGCGCTGC CCTGGCAGCT GGCCGACCTG AACGGCTGGC AGGCCCCCGC CGACGACGCG
AGCCACGACG CGGGCCACGC GGCCGGCGGC GGTGACCTGG CCGCGGCGGA CGAGTTCGCC
GGGCGCCGGG ACGCCGTCCG GGCGGACTCG CTCGCGACGA TCGTCTACAC CAGCGGGACG
ACCGGCATGC CCAAGGGCTG CATTCTCACC CACGGCAACC TGTTCGCCTC CAGCGCCAAC
ACCGTCGAGC ACACCGGCGA GCTGTTCCGG GTGTGGCGGC CCGCCGCGGG CACCGGAGCG
GCCGAGGGGT CGGCGGGATC AGAGGCGTCG GTCGAGCAGG CGTCGACCCT GCTCTGCCTG
CCGCTGGCAC ACGTCTTCGG CCGGACGATC CTCGTCGCCT GCATCTATGC CGGAACGCGG
ACCGGCCTGC TGGCGGCGGT CCCGGACATC CTGCCCGCGA TGGCGACCTT CCGGCCGACC
GTGCTCGCGC TCGTCCCCTA CGCCCTGGAG AAGATCCGCA AGGGGCTGCG CGGCGTCGTC
GACACCGACA CCGAGCTCGC GGCGGTGGCC GCCGGGCTGG CCGGCGACCC GGCCGACGGC
CCAGCCACCA GCCCGGCCGC CGAGCGGCGG CCCGCCCCGG CTGCGCTGGC CCGGATCAAC
GGCGTGTTCG GTGGCCGGCT GACCCACGTG ATCAGCGGCG GCGCGTCGCT GGACGCCACC
ACGGCGGCCT TCTACCGCGG GGTCGGCGTG CGGATCCTGA ACTGCTACGG CCTCACCGAG
GCCGCGACGG CGGTGACCGT CAACCAACCC GGCACCAACC GCATCGGCAC GGTCGGCCAG
CCGATCCCCG GCACCACCGT GGCGATCTCC CCGGACGGCG AGGTGCTGGT CGCCGGCCCC
AACGTCTCCC CCGGCTACTG GCGGGCCGGC CAGGCCCCGT GGATCGAGCC CGCCGGCACC
CAGGCCGAGC CCGGCGCCGG CCCGTCCCGC TGGCTGCACA CCGGCGACCT GGGCCACCTC
GACGCCGACG GCTTCCTCGT CATCACCGGC CGCCGCAAGG AAATCCTGGT CACCAGCGGT
GGCAAGAACG TCACGCCGAC CCTGCTCGAG GACAGGATGC GGCTGCACCC GCTGGTCGCC
GACTGCATGG TCGTCGGTGA GGCCCGCCCG TACGTCGCCG CCCTGGTGAC GACCGACCAG
GGTGCGCTCA ACGCCCTGGC CGCGGCGCAC GGCATCGACC TCGCCGCCTC CGGCTGGTGG
GAGCACCCCG CCCTGCTCGA CCGGGTGCAG GAGGCGGTCG ACGACGCCAA CGGCCTGGTC
TCCCGGGCCG AGTCCATCCG CCGGTTCCGA ATCCTCCCCA CCCAGCTCAC CATCGACGCC
GGTCACCTGA CGCCCTCGAT GAAGCTGCGC CGCGCACCGA TCGAGACGGC CTTCGCCACC
GAGATCGAGC AGCTCTACTC CCCGGCCGCC GCCCCGGCAC CGGCCTGA
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| Protein sequence | MQQYTLGAGR VLPDDRGLYS LVDDRVRTDP DRVILSRPTG TDWHDVTFRE LDAHVRRVAA
VLLGHGVGVG DRVGIVGRTS YEWVVADLAV LALGAITVPI FPTASPAQIT HIVTDSGMAW
CFVETPEHHS AVATAGAGTL LALPWQLADL NGWQAPADDA SHDAGHAAGG GDLAAADEFA
GRRDAVRADS LATIVYTSGT TGMPKGCILT HGNLFASSAN TVEHTGELFR VWRPAAGTGA
AEGSAGSEAS VEQASTLLCL PLAHVFGRTI LVACIYAGTR TGLLAAVPDI LPAMATFRPT
VLALVPYALE KIRKGLRGVV DTDTELAAVA AGLAGDPADG PATSPAAERR PAPAALARIN
GVFGGRLTHV ISGGASLDAT TAAFYRGVGV RILNCYGLTE AATAVTVNQP GTNRIGTVGQ
PIPGTTVAIS PDGEVLVAGP NVSPGYWRAG QAPWIEPAGT QAEPGAGPSR WLHTGDLGHL
DADGFLVITG RRKEILVTSG GKNVTPTLLE DRMRLHPLVA DCMVVGEARP YVAALVTTDQ
GALNALAAAH GIDLAASGWW EHPALLDRVQ EAVDDANGLV SRAESIRRFR ILPTQLTIDA
GHLTPSMKLR RAPIETAFAT EIEQLYSPAA APAPA
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