| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3956 |
|---|
| Symbol | |
|---|
| ID | 5672317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4736833 |
|---|
| End bp | 4737837 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641242835 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001508252 |
|---|
| Protein GI | 158315744 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4757] Predicted alpha/beta hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00786101 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0406632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCA CCGAGTCGAC GACCCCCGCC GACCCCACCG GAGCCGCACC GCCCACCGCC
CCCGGCGGCG GCACCGATGC CGGTGCCGAT GCCGGTGCCG CCCGTCCGAG CGCGGCCGCC
GGCCCGGAGA AGGTACCGGT ACCGGTCTCC AACGGGATCA CGCTCATGGT CCGGGCGATG
GCGCAGCCCG ACCCGATGGC GCCCGTCGTG CTGCTGCTGC CGGCGATGGC CCTCAAGGCG
AAGTTCTACC TGCCGATGGC CAGGGCGCTG TTCGCGGCGG GCCTGTCGGT GGCCACCCTC
GACCAGCGCG GGTACGGCGA GAGCACGCCC GGCCTGCGCG AGCAGCCGAA CTTCGGCTAC
CGCGAGCTGA TCGAGGTCGA CATGCCCGCG GCCGTCGGTG CCGTCCGGGC CCGCTTCCCC
GGGGCCCCGC TGTACCTGTT CGGCCACAGC CTCGGCGGTC AGCTCGCCCT CTTCCACGCG
GCGGCCGCGC CGGGCGAGAT CGCCGGCGTC GTGACGATCG GCACCGGCAC CCCGTACTGG
AAGGCGTTCG GACGTCGCAA CTGGTTCGAG GCGTTCTGGA AGATCCAGAC CATCGGCCTG
GTCTCCCGGG TGCGCGGGTA CTGGCCCGGC GGAATGCTCA TCGGCGGCGC GATGGCCGGT
CAGGTGATGG TCGACTGGGC GCGCCAGTCC CGGACGAGCA GGTGCCGTCC CAGGGGCTCG
ACGCGGCGCC ACGACGACGC GCTGCGCGCG CTGGACCGGC GGGTGCTGGC GATCTCGCTG
GACGACGACC GGCTCGGTCC CAGCTCGAAC GTGGACTTCC TCTGCTCGCG GATGCCCGCG
GCGCGGCTGA CCCGGTGGCA CGTCGTGGAG TCCTCCGGGG TCGCCCACCG CGACCACTTC
GCCTGGATCA AGGACAGCGC GGTCATCGGC CGGGCCGCGG CGAGCTGGAT CACCAGCGGG
CGACTGCCCG CCGAGCAGGC CGGCGGAGAG AGGAACGGGC GATGA
|
|---|
| Protein sequence | MPTTESTTPA DPTGAAPPTA PGGGTDAGAD AGAARPSAAA GPEKVPVPVS NGITLMVRAM
AQPDPMAPVV LLLPAMALKA KFYLPMARAL FAAGLSVATL DQRGYGESTP GLREQPNFGY
RELIEVDMPA AVGAVRARFP GAPLYLFGHS LGGQLALFHA AAAPGEIAGV VTIGTGTPYW
KAFGRRNWFE AFWKIQTIGL VSRVRGYWPG GMLIGGAMAG QVMVDWARQS RTSRCRPRGS
TRRHDDALRA LDRRVLAISL DDDRLGPSSN VDFLCSRMPA ARLTRWHVVE SSGVAHRDHF
AWIKDSAVIG RAAASWITSG RLPAEQAGGE RNGR
|
|---|
| |