| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3955 |
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| Symbol | |
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| ID | 5672316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4736180 |
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| End bp | 4736836 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641242834 |
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| Product | GDSL family lipase |
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| Protein accession | YP_001508251 |
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| Protein GI | 158315743 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00727916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.035201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGGA CACGGCTGAC GGTCCTGGGT GACAGCTTCG CGGAGGGCCG CGGCGACCCG
CGGCCCGGCG GCGGCTACGC CGGCTGGGTG CCCCGGTTCG CCGAGCTGTT CGGGATCCCG
CACGGCGGCT ACCGCAACCT CGGCACCCAC CAGGCCACCA CGCAGCACAT CCTGGAGTAC
CAGGTGCCGG CCGCCCTGGT CACCAAGGCC ACCGTGATCG GCGTCATCGG CGGGGTCAAC
GACCTGGTCA GCGACTACGA GCCGGCCCGG TTCCGACGCA ACCTCGCCGC GGTCCTCGGC
CGGCTCGCCG GCCCGGACAC CGTGCTGTTC ACCGCCACCT ATCCCGACAT CCCCGGGAAC
CTGGCCGTCC CGGCCTCGTT CCGGGCGCTG CTGCGCGACC GGTTCGCGCA GGCCAACGCA
TACCTGCAGG AGACGGCGGC CGCCACCGGC GCCGTGTGCC TGGACATCGC CGCGGCCACC
GAGTGGCGCG GCCGGGCGCT GTGGGACCCG GACGGGCTGC ACCCGAACCC GGCCGGGCAC
CGCCACTTCG CCGAGACCAT GGCCGACCAC CTCGACCGCC ACACCGGCAT GGCGCCGGTC
GGCCGCGAGC CGGCGGGTGT CGGAGCCGGC GCGGGCGGCG GGCTGCTGTC CTACTGA
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| Protein sequence | MSRTRLTVLG DSFAEGRGDP RPGGGYAGWV PRFAELFGIP HGGYRNLGTH QATTQHILEY
QVPAALVTKA TVIGVIGGVN DLVSDYEPAR FRRNLAAVLG RLAGPDTVLF TATYPDIPGN
LAVPASFRAL LRDRFAQANA YLQETAAATG AVCLDIAAAT EWRGRALWDP DGLHPNPAGH
RHFAETMADH LDRHTGMAPV GREPAGVGAG AGGGLLSY
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