Gene Franean1_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3926 
Symbol 
ID5672287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4694974 
End bp4696197 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content72% 
IMG OID641242805 
Producthypothetical protein 
Protein accessionYP_001508222 
Protein GI158315714 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.449305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0394993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCG TCCACGAGCT GGCGGGAGCG ACCGCGCCGA TCTGGATGTG GACACCTCCC 
CAGGAGGTCG AAAGCGCCGC GCTCGACCAG CTCCGCACCA TCGCGGAACT CCCCTACGTC
CACCACCACG TCGCCGTCAT GCCCGACGTC CACCTCGGCA AGGGCGCTAC GGTGGGTTCG
GTGATCGCGC TGCGCGACGC CGTCTCCCCG GCTGCCGTCG GCGTCGACAT CGGATGCGGG
ATGGCCGCGC TGCGGACCAA CCTGACCGCC GCCGACCTGC CCGACGACCT CGGGCCGGTG
CGGGCCGCGG TCGAGGCGGC CATCCCCGTC GGCCATCGCG GGCACACCGA GATCTCCCGC
CGGGTCCGCG GCTACGCCGA CCTGTGGGGG ACCTTCGGCG ACCTACACCC CAAGGTCACC
GGGCGCAGCG GCAGCATCGA CCGGGTGATG GCGCAGATGG GCAGCCTGGG CTCGGGCAAC
CACTTCGTCG AGCTCTGCCT GGACACCGAG GACGCCGTCT GGCTCATGCT GCACTCGGGC
TCGCGCAACA TCGGCAAGAC CCTCGCCGAG CTGCACATCG CGGCCGCGAA GAAGCTCCCG
CACAACACCG GCCTGCGCGA CCGGGACCTC TCCGTCTTCC TCGCCGGCAC CCCCGAGATG
GCCGCCTACC GAGCCGACCT CACCTGGGCG CAGACCTACG CGCGCCGCAA CCGCGACACC
ATGCTCGCTC TCTACGTCGA CGCGCTGCGC GACCACCTGC CCACGCTGCG CGTGCCGACC
CCGCCCACGC ACGGGCCGCA CGCCGCCGAC ACCGCCTTCG CCGCGGTCAA CTGCCACCAC
AACTACGTCG CCGAGGAGCA CCACTACGGA GCGGACGTCC TGGTCACCCG CAAGGGCGCG
ATCTCGGCCC GGGCCGGCGA GTACGGGATC ATCCCCGGCT CCATGGGCAC CCGCTCGTAC
ATCGTCCGCG GCCTCGGTAG CGCCGAGTCG TTCCACTCGG CCGCGCACGG CGCCGGGCGG
CGGATGAGCC GTACCCGTGC CCGCAAGGAG TTCACCACCG ACGACCTCGT CGCCCAGACC
ACCGGCGTCG AGTGCCGCAA GGACCCCGGA GTCCTCGACG AGATCCCCGC TGCCTACAAG
GACATCGACG CCGTCATCGC CCACCAGAGC GATCTCGTGG ACGTCGCCGC CGAGCTGCGC
GCCGTCCTCT GTGTGAAGGG CTGA
 
Protein sequence
MTPVHELAGA TAPIWMWTPP QEVESAALDQ LRTIAELPYV HHHVAVMPDV HLGKGATVGS 
VIALRDAVSP AAVGVDIGCG MAALRTNLTA ADLPDDLGPV RAAVEAAIPV GHRGHTEISR
RVRGYADLWG TFGDLHPKVT GRSGSIDRVM AQMGSLGSGN HFVELCLDTE DAVWLMLHSG
SRNIGKTLAE LHIAAAKKLP HNTGLRDRDL SVFLAGTPEM AAYRADLTWA QTYARRNRDT
MLALYVDALR DHLPTLRVPT PPTHGPHAAD TAFAAVNCHH NYVAEEHHYG ADVLVTRKGA
ISARAGEYGI IPGSMGTRSY IVRGLGSAES FHSAAHGAGR RMSRTRARKE FTTDDLVAQT
TGVECRKDPG VLDEIPAAYK DIDAVIAHQS DLVDVAAELR AVLCVKG