| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3919 |
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| Symbol | |
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| ID | 5672280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4686010 |
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| End bp | 4687023 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242798 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001508215 |
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| Protein GI | 158315707 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0212257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTG ATCCTGTCCT GCAGGTGCGC AATCTGCGCG CCTACATCGG CACCCCGCGT
GGAGTCGTGC GCGCCGTCGA CGACGTCTCC CTCGACCTCG ACTCCGCCCA GGCCATGGGC
GTGGTCGGGG AGTCCGGGTC CGGCAAGTCG GTGATGGCCC GCGCGATCAT GGGCCTGATG
CCGGCACGGT CCGGGTGCTC CGGCCAGGTG GTGTTCCAGG GCCGGGACCT GCTCACCCTC
CCCCGCAAGC AGCGCGCCGA GATCTGGGGC AAGCAGATCG CCATGGTGTT CCAGGACCCA
GGGCGCTCGC TCAACCCGGT GGTTCGGGTG GAACGGCAGC TCACCGAGGG AATGCGCAAG
CACCTCGGCG TCGGCCGCTC CGAAGCTCGC GGTCGGGCCC TCGACCTTCT GCGGGAGGTC
GGGGTGCCCG ACCCCGAGCG GCGCCTGCGC AACTACCCGC ACGAGCTCTC CGGCGGTATG
CGGCAGCGAG TCATGATCGC TACCGCGCTC GCCTGCGAGC CGACGCTGCT CATCGCCGAC
GAGCCGACCA CAGCGCTGGA CGTGACCGTC CAGCGCCAGA TCCTCGACCT GTTACGCCGG
GTCCAGCGCA ACCACGGAAT GTCCATGATC CTGATCAGCC ACGACCTGGC GGTCGTCGCC
GGCCGCACCG ACCGGGTCGC GGTGATGTAC GCGGGGCGCC TGGCCGAGGC CGGGGCCACC
CGGCAGGTCT TCGAGGCCCC CCGGCACCGC TACACCCACG CGCTGCTCGA GGCGACCCCG
ACCATCGACC ACGAGCGGCA CGCACCGATG CGGCTCATCC AGGGCTCGCT GCCCAACCCC
ATCGACCCGC CCCCCGGATG CCGGTTCGCC GCGCGCTGCG GGCACGTCGA CCCCAAGTGC
GCCGACCCCG GGCCGCAGAT GGTCTCCGTC GGCTCGGATC ACGATGTCGC CTGCATCAGC
CCGGTGCAGG ACGGCGCCGC GGTCGTCCCC GGAGGTGAGC TCGTTGGCCG GTAG
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| Protein sequence | MSTDPVLQVR NLRAYIGTPR GVVRAVDDVS LDLDSAQAMG VVGESGSGKS VMARAIMGLM
PARSGCSGQV VFQGRDLLTL PRKQRAEIWG KQIAMVFQDP GRSLNPVVRV ERQLTEGMRK
HLGVGRSEAR GRALDLLREV GVPDPERRLR NYPHELSGGM RQRVMIATAL ACEPTLLIAD
EPTTALDVTV QRQILDLLRR VQRNHGMSMI LISHDLAVVA GRTDRVAVMY AGRLAEAGAT
RQVFEAPRHR YTHALLEATP TIDHERHAPM RLIQGSLPNP IDPPPGCRFA ARCGHVDPKC
ADPGPQMVSV GSDHDVACIS PVQDGAAVVP GGELVGR
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