| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3918 |
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| Symbol | |
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| ID | 5672279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4684239 |
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| End bp | 4686020 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242797 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001508214 |
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| Protein GI | 158315706 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.432636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0575637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGGTA GCGGAACCGC CCATCTGCGC GGCGAGGACG CGCTGCTCAG CGTGCGCGAC
CTGGTGGTCG AATACCCGAC CAAGGGCGGG GTGGTCCAGG CCGTCTCCAA GGTCAGCTTC
GACGTCCTGC CCGGCGAGAC GCTCGGGATC GTCGGCGAGT CCGGCTGTGG GAAGTCCACG
ACCGGGCGCG CCGTGCTCCG GCTGGACAGG CTGACCTCCG GCCAGATCAC GTTCGCCGGC
GAGCGCATCG AGGGAGTCGG CGAACGCCGG ATGCGCGAGC TCCGCCGCTC CATCCAGATG
ATCTTCCAGG ACCCGGTGGC GTCGCTGAAC CCCCGCCGCA GCGTCAAGGA CATCGTCGTC
GAGGGTCTGG CGGTTGCCCG TGCCCCGGCG TCCGAACGGG CCACCGTGTC GGCGTCCGTC
CTCGGACAGG TCGGGCTGGA CGGCGACCGC TTCGCCGACA TGCTGCCCCG CCAGCTCTCC
GGCGGCCAGG CACAGCGGGT GGCGATCGGC CGCGCGCTCG CGCTGCACCC GCGGCTGCTG
ATCTGCGACG AGCCGGTCTC CGCGCTGGAC GTCTCCGTGC AGGCGCAGAT CCTCAACCTG
ATCGAGGAGC TGAAGGCCGA GTTCGACCTG ACCGTCGTGT TCATCGCGCA CGACCTCGGG
GTCGTGCGGG CGGTCAGCGA CGACGTCCTG GTCATGTACC TCGGCAAGGT GTGCGAGTTC
GGCGACTCCG ACCTGGTGTA CGACCAGCCC GCCCACCCCT ACACCCGGGC GCTGCTGGAC
TCCGTCCCGC TGACCGACCC GGAGCGCGGC TTCACCGGTC CCGCGTTGGA GGGCGACCTG
CCCTCCCCGC TGTCCCCGCC GACGGGATGC CGTTTCCGCA CCCGGTGCCC GTTGGCCGAG
GAGCGCTGCG CCGCCGAGGA GCCGGAGATC CGCGAGGTCC GCCCGGGCCA GTACGTCGCC
TGCCACTTCC CGCTGACCTC ACCGCTGGCC GAATCGGCGG CCGCGGCAGC GGCCACGGAG
GTGGCCACGC CGGTCACCGC CCCCCTGACC GAGACCACGC CCGACGCCAC CGAGCCCTCG
GCGAGCGAGC TCACAGCCAC CACACCCGAG GCCACCAAGC CCCCGGTCGC CGAAGAGCCC
CCGGTCACCG AGCCCGCGGC CACCAAGTCG GTGGCCGCCG AACCTGTGGC CGCCGAACCG
GTCGCAGGCA AGCCCGCGGC CAGCGAGCCC GCGGCCGCCA AGCTCACGCC CGGCGAACCG
GCGACTGCGA CTGCGACAGC GGCAGAGCCC ACGGCTGTCG AGTCCAAGGT CGCCGAGCCC
GTGGTGGCGG GGGCCGAGCC CGCGCCCGCC ACGTCGGGGA CCGCCGAGCC CGCGCCCGCC
AAGGCCGCCG CGGCACCCGC CACCACGGCC CCTGCCACCA CGGGCGACGA GGCGGCGGCC
GCGGACGACC AGGCGGCGGG CGACCCGCCG ACGGTCGAAT CGGCCGCCGG TGAGCAGACC
ACGACCGAGG CCTCGACGAA GCCGACCACC GACGAGTCAG TGGCGGCCGA GACCGCCGCC
GTGCCAACCC CGGCCACCGA CGACCCGGCC ACGGTCGAGA CCGCGACGAC GCCGAGTGGC
ACCGCGGCGC CCGCGAGCAC CGAGCCTCCC ACGGCTACAG CGACCACGGA GCAGGCCACG
GAGGCTGGTG ACCCGCCCAC CGTCGAGACG ACCGTGAGCG ACGACGCGGA TGGCAGCGCA
GCCGGGGAGA CGAAGAAGAC CTCTGGGGGC ACCACCGCCT GA
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| Protein sequence | MAGSGTAHLR GEDALLSVRD LVVEYPTKGG VVQAVSKVSF DVLPGETLGI VGESGCGKST
TGRAVLRLDR LTSGQITFAG ERIEGVGERR MRELRRSIQM IFQDPVASLN PRRSVKDIVV
EGLAVARAPA SERATVSASV LGQVGLDGDR FADMLPRQLS GGQAQRVAIG RALALHPRLL
ICDEPVSALD VSVQAQILNL IEELKAEFDL TVVFIAHDLG VVRAVSDDVL VMYLGKVCEF
GDSDLVYDQP AHPYTRALLD SVPLTDPERG FTGPALEGDL PSPLSPPTGC RFRTRCPLAE
ERCAAEEPEI REVRPGQYVA CHFPLTSPLA ESAAAAAATE VATPVTAPLT ETTPDATEPS
ASELTATTPE ATKPPVAEEP PVTEPAATKS VAAEPVAAEP VAGKPAASEP AAAKLTPGEP
ATATATAAEP TAVESKVAEP VVAGAEPAPA TSGTAEPAPA KAAAAPATTA PATTGDEAAA
ADDQAAGDPP TVESAAGEQT TTEASTKPTT DESVAAETAA VPTPATDDPA TVETATTPSG
TAAPASTEPP TATATTEQAT EAGDPPTVET TVSDDADGSA AGETKKTSGG TTA
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