Gene Franean1_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3913 
Symbol 
ID5672274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4678706 
End bp4679554 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID641242792 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001508209 
Protein GI158315701 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.939389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.094583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAGG GTTCTGCCAG GAGTTTCAAG GTGGGAGACA GCGTGACCGA CTGGGCACTG 
GGATCGTCGC TTCTGTTCTG CCCGGCGGAC CGGCCGGACC GGTACGAGAA GGCCCTGGCG
GCCGCGGACA CCGTGATCCT CGACCTCGAG GACGCGGTCG CCCCCGCGCG GCGCCCTGAG
GCCCGTGTGG CGCTCGTCGA GCACCCCGTG GACCCGGCCC GCGTGATCGT CCGGGTGAAC
CCGCGGTCGA CCGCCGACTA CGACGAGGAC ATCCGCTGCC TCGCCCGCAC CGGGTACCGC
ACGATCATGC TGGCGAAGAC CGAGGACGTC CGCGAGGTCG AGGAAGCGGA CCGCTACCAG
GTGGTCGCGC TGTGCGAGAC GGCGCGTGGG GTTCTCGCCA GCGCCGAGGT GGTGCGCGCG
CGGAACCTGG CGGGCGTGAT GTGGGGCGCG GAGGATCTGA TGGCGTCGCT CGGCGGCAGC
TCGAGCCGGC TGCCCGACGG GCGGTACCGC GATGTCGCGC GGCACGCCAA GTCCACCGTC
CTGCTGCACG CCGCCGCCTC CGGCGTGCCG GCGATCGACA CGGTCTTCCT GGACGTCGCC
GACGTCGCCG GCCTTGCCGC GGAGGCCGAC GAGGCCGTCG CGTCCGGCTT CGTGGCCAAG
GCGTGCATCC ATCCCTCGCA GGCGGCCGTC GTCCGCCGGG CGTTCCAGCC GTCCGCCGAG
AACGTCACCT GGGCCCGGCG GGTCGTGGCC GGCAGCGAGG ACAGCGCCGT GTTCCTGCTC
GACGGCCAGA TGATCGACGC GCCGCTCGTC GCGCAGGCCC GCCAGATCCT GCGCCGGGCG
GACGCCTAG
 
Protein sequence
MVEGSARSFK VGDSVTDWAL GSSLLFCPAD RPDRYEKALA AADTVILDLE DAVAPARRPE 
ARVALVEHPV DPARVIVRVN PRSTADYDED IRCLARTGYR TIMLAKTEDV REVEEADRYQ
VVALCETARG VLASAEVVRA RNLAGVMWGA EDLMASLGGS SSRLPDGRYR DVARHAKSTV
LLHAAASGVP AIDTVFLDVA DVAGLAAEAD EAVASGFVAK ACIHPSQAAV VRRAFQPSAE
NVTWARRVVA GSEDSAVFLL DGQMIDAPLV AQARQILRRA DA