| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3909 |
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| Symbol | |
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| ID | 5672270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4675340 |
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| End bp | 4676134 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641242788 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508205 |
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| Protein GI | 158315697 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.249889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.105772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CGATGACCGG CCTGCTGGAC CTGACCGGCC GGGTGGCCAT CGTCACCGGC
GGCGGGACGG GCATCGGGGC GGCCACCGCG CGGCTGCTCG CCGCCCACGG CGCCGACGTG
GCCGTCGCCG CGCGCACCGT CGACGAGCTG GAGCGGACCG CGGCGGACAT CCGGGCCGCC
ACCGGCCGCC GCTGCCTGGC CGTGCCGACG GACGTCAAGG ACGAGGAGCA GGTGATCCGG
CTGGTGCGGC GCACCGTCGA GGAGCTCGGC CGGATCGACG TGCTGGTCAA CAACGCCGGC
GGCACCCGCA TGGGCCCGCT CTCCTCGCTG CCGACCAGGG CCTGGGACGC CAGCTTCGAC
CTCAACGTGC GGGCGGCCTA CTTCTGCACC CGGGAGGCCG GCCGTCACCT GGTCGCGCAG
CGCTCGGGCG CGATCGTCAA CATCTCCTCG GACGCCGGCC TGCACGGAGT GCGCGGCGGA
GCGCACTACG CCTCGGCCAA GGCCGCGCTG CAGATGTTCA CGACGGTCAC CGCGGCCGAG
TGGGGACGTT ACGGGGTGCG TGCCAACTGC CTCGCTGTCG GGCCGGTCGC CTCGGAGCGC
GCAGTCGAGG CGTGGCGCGT CGCCGGCATC GACACGTCCG AGTTCAACAC CGCCACCCCT
CTGGGCCGGC CGGGGACGCC CGCGGAGGTC GCGAACGCGG TCCTCTTCTT CGCCAGCGAC
GCGGCGTCCT ACATCACCGG GCAGACCCTC GCCGTCGACG GCGGACCGAG CCTGGGCGGG
ATCCGCGACA CCTGA
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| Protein sequence | MSTPMTGLLD LTGRVAIVTG GGTGIGAATA RLLAAHGADV AVAARTVDEL ERTAADIRAA
TGRRCLAVPT DVKDEEQVIR LVRRTVEELG RIDVLVNNAG GTRMGPLSSL PTRAWDASFD
LNVRAAYFCT REAGRHLVAQ RSGAIVNISS DAGLHGVRGG AHYASAKAAL QMFTTVTAAE
WGRYGVRANC LAVGPVASER AVEAWRVAGI DTSEFNTATP LGRPGTPAEV ANAVLFFASD
AASYITGQTL AVDGGPSLGG IRDT
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