| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3907 |
|---|
| Symbol | |
|---|
| ID | 5672268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4673296 |
|---|
| End bp | 4674441 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641242786 |
|---|
| Product | Propanoyl-CoA C-acyltransferase |
|---|
| Protein accession | YP_001508203 |
|---|
| Protein GI | 158315695 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.114937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.102476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGATG TCGCGATCAT CGGGGTGGGC ATCCACCCCT TCGGGCGCTT CGGCAACAAG
TCGGCGATCC AGATGGGCGC CGAGGCCGTC CGCTCCGCGC TCACCGACGC CGGCCTGGAG
TGGAAGCAGG TCCAGTTCGC CTTCGGCGGG AGCTGTGAGG TGGACAACCC CGACGCGGTC
GTGGGCCTGC TCGGCCTCAC CGGCATCCCG TTCATGGACG TCTACAACGG CTGCGCGACG
GCCGCGACCG CGCTGGAGCT GACCGCCGAC GCGATCCGGT ACGGCAAGTA CGACATCGGC
CTCGCGGTCG GCATGGACAA GCACGCCTTC GGCGCCTTCA CGGCCGATCC CGTCCACTAC
AGCGCCCCGC CGTGGTACGG CGACATCGGT CACTTCCTGA CGACGAAGTT CTTCGGGATG
AAGATCAACC GCTACATGCA CGACCACGGG ATCTCGCACC GCACGCTGGC CCGGGTGGCG
GCGAAGAACT ACCGCAACGG CGTGCTGAAC CCCAACGCCT TCCGTCGCAA GGCGCTGACG
GAGGACGAGA TCCTCACCTC CCAGATGCTC AACTACCCGC TGACGAAGTA CATGTTCTGC
AGCCCGGACG AGGGCGCCGC GGCGATCATC CTGTGCCGCG CCGACATCGC CCGCCAGTAC
ACGTCCAACC CCATCTACCT GCGGGCGAGC ACGCTGCGGA CCAGGACGTA CGGCGCGCAC
GAGGTGCACA GCTCCTGGGC CGCGGTGGAG CACGCCGAGG CCCCCACCGT GTTCGCGTCG
CGGGCGGCCT ACGAGACCGC GGGCATCGGC CCGGAGGACG TCGACGTCAT CCAGATCCAG
GACACCGACT CCGGTGCCGA GATCATGCAC ATGGCGGAGA ACGGCTTCTG CGCGGACGGC
GACCAGGAGA AGCTGCTCGC GGAGGGCGCC ACCGAGATCG GCGGCCGGCT GCCGGTCAAC
ACCGACGGCG GGCTGATCGC CAACGGCGAG CCCGTCGGCG CCTCGGGTCT GCGCCAGATT
CACGAGCTGG TCCTGCAGCT GCGCGGGCAG GCCGGCGACC GGCAGGTCCC CGGCAACCCG
CGGGTCGGCT ACGCCCAGCT CTACGGCGCG CCCGGCACGG CCGGCGTGTC GATCGTGACC
ACCTGA
|
|---|
| Protein sequence | MEDVAIIGVG IHPFGRFGNK SAIQMGAEAV RSALTDAGLE WKQVQFAFGG SCEVDNPDAV
VGLLGLTGIP FMDVYNGCAT AATALELTAD AIRYGKYDIG LAVGMDKHAF GAFTADPVHY
SAPPWYGDIG HFLTTKFFGM KINRYMHDHG ISHRTLARVA AKNYRNGVLN PNAFRRKALT
EDEILTSQML NYPLTKYMFC SPDEGAAAII LCRADIARQY TSNPIYLRAS TLRTRTYGAH
EVHSSWAAVE HAEAPTVFAS RAAYETAGIG PEDVDVIQIQ DTDSGAEIMH MAENGFCADG
DQEKLLAEGA TEIGGRLPVN TDGGLIANGE PVGASGLRQI HELVLQLRGQ AGDRQVPGNP
RVGYAQLYGA PGTAGVSIVT T
|
|---|
| |