Gene Franean1_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3905 
Symbol 
ID5672266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4671566 
End bp4671988 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content71% 
IMG OID641242784 
ProductTOBE domain-containing protein 
Protein accessionYP_001508201 
Protein GI158315693 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4148] ABC-type molybdate transport system, ATPase component 
TIGRFAM ID[TIGR00638] molybdenum-pterin binding domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0935603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGA GCATCCGCAA CCAGCTGACC GGAACCGTAA GCGAGATCAC CCGGGGGGCG 
GTGATGAGCA CGGTACTGAT CACGCTGCCC GGCGGGCAGA GCCTGACCGC GGCGGTGACA
CTCGACGCCG TCGACGACCT CGGCCTCAAG GAGGGCTCGG GGGTCGACGT CCTGATCAAG
TCCACCGAGA TCTCGCTGGC CACCGGCAAC GTGGACGGCC TGAGCATCCG CAACCAGCTG
CGCGGCACCG TCTCGAGCAT CGAGACCGGC GGCGCCATGG CCGTGGCACA TGTCACCCTC
GAGCAGGGCG GCGAGCTCAC CGCGGCGATC ACCCTCGCCG CCGCGACCGA GCTCGGCCTG
GCCGCGGGCA CCGCCGTGAC CGCCCTGGTC AAGTCGACCG AGGTGGCCGT CGCCGCCGCC
TGA
 
Protein sequence
MSLSIRNQLT GTVSEITRGA VMSTVLITLP GGQSLTAAVT LDAVDDLGLK EGSGVDVLIK 
STEISLATGN VDGLSIRNQL RGTVSSIETG GAMAVAHVTL EQGGELTAAI TLAAATELGL
AAGTAVTALV KSTEVAVAAA