| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3875 |
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| Symbol | |
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| ID | 5672238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4605029 |
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| End bp | 4606039 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242753 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508173 |
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| Protein GI | 158315665 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.893798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0397379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGG CCACCTCCGG CGCCGGCGGC CCGGCCACCG GTGCCGGCGC GGTGGCCGGG
CCCGGGTTCG ACCGGGAGTC GACGGCGCTG GAGGTGGCCC GCAGTGCCGA CCTGCGTGGG
CGCGTCGCGG TGCTGACGGG GGCCTCCTCC GGCATCGGCG TCGAGACGGC GCGCGCCCTG
GCAGCCACCG GCGCCGACGT CGTGCTGGGC GTTCGGGATG TCGCCGCCGG CGAGGAGCTG
GTCCGCGAGG TGCGGGCCGG CGCCACAGGC GACATCCGGG CGGAGCGGCT GGACCTGAGC
GATCTCGGTT CGGTCGTCGC GTTCGCCGCC CAAGTCACTG GCCCCGTCGA CCTGCTGATC
GCCAACGCGG GGGTCTCCAG GACCCCGGAG TCACACCTGC CCAACGGGCT CGACGTCCGC
TTCGCGACGA ACCACCTGGG CCACTTCCTG CTGGCGCTGC GCCTGAGCGA ACAGCTCGCC
GAGCGTGGAG CGCGGATCGT CGTGGTCAGC TCGGGCGCGC ACAGGAGCAT CCCCGTCCGC
CTCGACGACC TGCAGTGGAC CGCCCGGCGG CACAACCCGG GGATGGCCTA CGCCGAGTCG
AAGACCGCGA ACATCCTCTT CGCCCAGGAG GCGACCCGCC GGTGGGGACC CGACGGGATC
TTCGCGAACG CGGTGCTGCC CGGCTCGGCG CTGACCGGCC TGCAACGCTT CCACGGGGAC
GAGATGAAAC GCCGGATCGG CTTCCTCAAC GAGGACGGAT CTCCCAACCC GGTGCTTAAA
TCCCCTGCCC AGGCCGCGGC CACGACCCTC TGGGCCGCCA CGGCCCCGGA ACTGGCCGGG
CGTGGCGGCC TCGTCCTCGA GGACTGCGCA GAGGCGCTAC CCCCCGGCCC GCCCGGCTCG
GACGTCCTGG TCCGCTCGGG CTTTGACCCC TCGGTCGCCG ACCCCGACAC GGCCCGCCGC
CTGTGGGACC GCTCCATCGA GCTGCTCCGG GTCCTCGGCC GACCAGAATG A
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| Protein sequence | MTAATSGAGG PATGAGAVAG PGFDRESTAL EVARSADLRG RVAVLTGASS GIGVETARAL
AATGADVVLG VRDVAAGEEL VREVRAGATG DIRAERLDLS DLGSVVAFAA QVTGPVDLLI
ANAGVSRTPE SHLPNGLDVR FATNHLGHFL LALRLSEQLA ERGARIVVVS SGAHRSIPVR
LDDLQWTARR HNPGMAYAES KTANILFAQE ATRRWGPDGI FANAVLPGSA LTGLQRFHGD
EMKRRIGFLN EDGSPNPVLK SPAQAAATTL WAATAPELAG RGGLVLEDCA EALPPGPPGS
DVLVRSGFDP SVADPDTARR LWDRSIELLR VLGRPE
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