Gene Franean1_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3874 
Symbol 
ID5672237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4603890 
End bp4605032 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content72% 
IMG OID641242752 
Producthypothetical protein 
Protein accessionYP_001508172 
Protein GI158315664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0811727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGA GAGTCCGGGT TTCACTACCT GACCACCTGT TCCGCGGCGC GGGCGCGTGG 
GCGCCCGGCC GACCGAGATG TGAGGGAGAC ACCATGGCGA TCGACCTGAC CGGCGGTCTG
AGCGACGACC GCGAGTACGT GTTCCCCGCC CAGCCCGACA ACCCGGACCT GCGCGAGTCG
GTCAACGCGT GGGTGTGGGA CGACGGCGTC GAGTTCGGAT TACCCCGAAT CGGCATCGAG
GCCGCCGCGG ACCAGTGGGA CACCCACGAC ATCCAGGTGA ACATCGCGTT CGCCGGCGGC
CGGGTGCTCA ACATGTACGG CCCCAGGAAG GTGCACGACC CGCTGGGCGC GGACGGGAAG
GCCCGCATCC TGGGCGCGGG GCCGCTGTCC TTCGAGCTGG TCGAGCCCTA TCGGCACTGG
AAGATGCACC TGGAGGGCCC CGCCGTGGTG ACCTCCGCCG AGGATCAGAT CGGCGGCTGG
AAGCGCGGCG TCACCGGCGG GCCGACCGTC GAGGTGCGCC TCGAACTGGA CATCAGGCCC
GCGGTGCCGC CGTGGGAGAG CGGCACGCTC CTCGAGGAGG CCGACCGGGT CCTCGCCACC
CAGGAGGAGG GCGACCTGAT GGGCGGCCCC CGCTTCGAGC AGCTCTCCCG GGTGACCGGC
CGCCTGCAGG TCGACGACGA GGTCCACGAG CTCAACGGCG GCGGCCTGCG GATCCGCCGC
GCGGGCGTTC GCCGGCTCGC CACCTTCCGC GGGCATGTCT GGCAGTCGGC GCTGTTCCCG
AGCGGGCGCG CGTTCGGGCT GTGCCTCTAC CCGCCGCGCG CCGACGGCAA GCCGACCTTC
AACGAGGGCT TCCTCTTCGA GGGCGACGGC GCGCTCATCC CGGCCTGGGT CGTCGACGCG
CCCTGGCTGC GCGAGCTGCG GCCCACCGGC GAGGATGTCT CCGTCACCCT CGAGACCGAG
GACGGCCGGA CGACGACGAT CCACGGCGAG TCGCTCCTGT CGACCTTCGC GGTGATGGGC
GCGGATATCG GCTCCCCCCA GCGCCTGAAC CTGCAGCAGG CCATCGCTCG CTACACCTGG
GACGGCGAGA CGGCCAACGG CATGATGGAG CGCTCCAGCG TGAGCGACAC GGTCGCCCAG
TGA
 
Protein sequence
MAWRVRVSLP DHLFRGAGAW APGRPRCEGD TMAIDLTGGL SDDREYVFPA QPDNPDLRES 
VNAWVWDDGV EFGLPRIGIE AAADQWDTHD IQVNIAFAGG RVLNMYGPRK VHDPLGADGK
ARILGAGPLS FELVEPYRHW KMHLEGPAVV TSAEDQIGGW KRGVTGGPTV EVRLELDIRP
AVPPWESGTL LEEADRVLAT QEEGDLMGGP RFEQLSRVTG RLQVDDEVHE LNGGGLRIRR
AGVRRLATFR GHVWQSALFP SGRAFGLCLY PPRADGKPTF NEGFLFEGDG ALIPAWVVDA
PWLRELRPTG EDVSVTLETE DGRTTTIHGE SLLSTFAVMG ADIGSPQRLN LQQAIARYTW
DGETANGMME RSSVSDTVAQ