Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3868 |
Symbol | |
ID | 5672231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4598832 |
End bp | 4599545 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242746 |
Product | ABC transporter related |
Protein accession | YP_001508166 |
Protein GI | 158315658 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.25715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATTGC TGGAGGTTAA GAACGTGACG GTCGCCTTCG GGGGCGTTCG CGCCCTCGAC GGCGTCGCCA TCGCGGCCGA GAAGGGGCGG GTCACCGGGC TGATCGGGCC CAACGGGGCC GGCAAGAGCA CGCTGTTCGA CGTGATCTCC GGGCTGCGCC GGCCGTCGTC CGGGCAGGTG TTCATCGACG GCCACGACGT CACCCGGCTG GGCCCGTCAC GGCGCAGCAA GCACGGGCTG GCCCGGACGT TCCAGCGGCT GGAGCTGTTC GGCCGGCTGA GCGTGCGCGA CAACCTCCTC GTCGCCGCGG AGCTGGGCCC GGAGCGTCGC AACGCGGCGA CCCTGGTCCC CGAGGTACTG GACAGGCTCG GCCTGACCGG CATCGCGGAC ACCTCCGCCG ACACGCTGCC GACGGGCGTC GCCCGGCTGG TGGAGGTGGC CCGGGCGCTG ACGGTCCGGC CGAAGCTCCT CCTGCTCGAC GAGCCCGCCG CCGGGCAGGA CGCCGAGGAG ACCGAGCGCT TCGCCGACCT GCTGCGCTCG CTCGCCGCCG ACGGGACCAC CGTGGTCATC GTCGAACACG ACATGGATCT GGTCATGAGC GTGTGCGACG ACCTGTACGT GCTCGACCTG GGCAAGGTCA TCGCCGCCGG CTCTCCGGAG GAGATCCGGC GCGACGAGCT CGTCCTGGCC GCCTACCTGG GAGACGCGGC ATGA
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Protein sequence | MALLEVKNVT VAFGGVRALD GVAIAAEKGR VTGLIGPNGA GKSTLFDVIS GLRRPSSGQV FIDGHDVTRL GPSRRSKHGL ARTFQRLELF GRLSVRDNLL VAAELGPERR NAATLVPEVL DRLGLTGIAD TSADTLPTGV ARLVEVARAL TVRPKLLLLD EPAAGQDAEE TERFADLLRS LAADGTTVVI VEHDMDLVMS VCDDLYVLDL GKVIAAGSPE EIRRDELVLA AYLGDAA
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