Gene Franean1_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3864 
Symbol 
ID5672227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4592501 
End bp4593313 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content75% 
IMG OID641242742 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001508162 
Protein GI158315654 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.991017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTGG TGCTGCTCCA GATCGCCTGC CCGGACGACG AGTCGCCGGC CGACCGCGGC 
GCGCGTGTCC TGGCCGACCT GCGCGGACTC GGCGCGGGTG AGGCCGACCT GGTCGTGTTG
CCCGAGCTGT GGCGCACCGG CTACTTCCAC TTCGACCGCT ACCCCGGCGA CGCCGAGGAG
CTGGCCGGCC CCACCGTCGG CGCGCTGCGG GAGGTGGCGG CCGAGCGCGA CCTGCACATC
GTCACCGGCA GCATCGTCGA GCGCGCTCCC GGTGGGGCGC TGCACAACAC CACCGCCCTC
GTCGGCCCGG ACGGAGCCCT CCTCGGCCGG TACCGCAAGA TCCACCTGTT CGGCCACGAA
TCCGCCGAGG CGACGTTGCT CACCGCCGGC GACGACGTGT TCGCCGCGCC CACGCCGCTC
GGGGCCGTCG GTCTGGCCAC CTGCTACGAC CTGCGGTTCC CTGAGCTGTT CCGGCTGCTG
GTCGACCGCG GCGCCGAGGT GGTCGTGGTG GTGTCGGCCT GGCCGCTGGC CCGCCTGGAG
CACTGGGAGC TGCTCGTGCG GGCCAGGGCC GTCGAGAACC AGGTCTTCGT CGTCGCCTGC
AACGCCGCCG GCCGGCACGG GGGAGTGGAG CTGGCCGGCA CCAGCCTCGT CGTCGACCCG
TGGGGCACCG TGCTGGCCCG GGCCGGTACC GGCCCGCAGA CCCTGCGGGC GGTGCTCGAC
CGGGCCAGGC TGGCCGCCGT GCGCGCCGAC TTCCCAGTGC TCGCGTCGCG GCGCCTTGCA
TCACCCGATG TAGGGCGGCC CCGGCTGATG TAG
 
Protein sequence
MRVVLLQIAC PDDESPADRG ARVLADLRGL GAGEADLVVL PELWRTGYFH FDRYPGDAEE 
LAGPTVGALR EVAAERDLHI VTGSIVERAP GGALHNTTAL VGPDGALLGR YRKIHLFGHE
SAEATLLTAG DDVFAAPTPL GAVGLATCYD LRFPELFRLL VDRGAEVVVV VSAWPLARLE
HWELLVRARA VENQVFVVAC NAAGRHGGVE LAGTSLVVDP WGTVLARAGT GPQTLRAVLD
RARLAAVRAD FPVLASRRLA SPDVGRPRLM