Gene Franean1_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3862 
Symbol 
ID5672225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4590427 
End bp4590816 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content71% 
IMG OID641242740 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001508160 
Protein GI158315652 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.149288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCTGC AGCGGATCGA GGTCGGGCTG GTCAGCACCG ACGAGTCCCT GGCGGAGTTC 
TACGCCACCA CGTTCGGGAT GGAGCGCCTG CCCGGCATCG AGGCGGGCCC CGGAGTCGTG
CACCGACTGC GGACGTCCGA CATCGTGATC AAGGTGATGA TCCCCAGGCG GGCGCCGGCG
GCCACCGAGC CGGCCACGCA CTTCTTCGCC GCGACCGGCC TGCGGTATAT CACCCTCTAC
TCGGACGATC TCGACGGCAT CGTCGAGCGG GCCACCGCCC ACGGCGGCAA GGTGACGCAC
GGCCCCGCGT CCATCGGGCC CGGTGTGCGC ATCGCCGTGC TGCAGGACCC GGACGGCAAC
GCGGTGGAGG TGGTCGAGGG CGCCTCCTGA
 
Protein sequence
MTLQRIEVGL VSTDESLAEF YATTFGMERL PGIEAGPGVV HRLRTSDIVI KVMIPRRAPA 
ATEPATHFFA ATGLRYITLY SDDLDGIVER ATAHGGKVTH GPASIGPGVR IAVLQDPDGN
AVEVVEGAS