Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3861 |
Symbol | |
ID | 5672224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4589595 |
End bp | 4590419 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641242739 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001508159 |
Protein GI | 158315651 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.464823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCCCG AGCCCGAGCC CGGGTCGGGC GAGGGCAGGG CGGGCGGGGG CAGGGTGCGG CTGGTGCGCC TCGAGGGCGC CGTCAACGTC CGTGACCTGG GCGGCTACCC GACCACGGGC GGGGGCCGGG TGCGCTGGGG CCGGGTCTAC CGGTCGGCGG CGCTGCACCG CCTCACCACC GCCGACCTGG CCACCGTCGA GCAACTCGGC CTGCGGGTCG TCTACGACCT GCGGACCGAG GCCGAGATCG AGCGGGCGCC GTCGCTGCTG CCCGGCGGGG TCCGGTGCGA GCGGCTCGCC ATCGGCGGCA GCGCGGCGAG GACCAGGGAG TTGACCGATC TCGTCGTCGC GGGCCGGCTG GCAGAGGTGC CGCCGGACTT TCTCACGCGC GTCTACGACG CGATGGCCGA GACGGGCGCA CCGACGTTCG GCCGCCTCCT CACCGGGCTC GCCGAGCCGG ACGCGACGCC GGCCCTGTTC CACTGCACGG CCGGCAAGGA CCGGACCGGG GTCGCCGCCG CGCTGCTGCT CTCGCTCCTC GGCGTCGACG AGGCGGTGAT CCTCGACGAC TTCGAGCTCA GCGCCGTCCA CTACACCGAC CCCAAGATGG CGCGGCTGCG GCGCCGGCTC GACGGCACCG ACGTGGACGT CGAGCGTTAC CGGGCCGTGT TCGGCGCGCC CAGGGAGGCA CTGGGCACGC TGCTGGCGGC CCTCACCGAG CGGCACGGGT CGGTGCAGGG CTACCTCGAG GAGGCCGCCG GGACCGCCCC CGACCTGCCC GAGCGGCTGC GAGCCCAACT CGTCGAGCCG CTCGGGCAGG GATGA
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Protein sequence | MTPEPEPGSG EGRAGGGRVR LVRLEGAVNV RDLGGYPTTG GGRVRWGRVY RSAALHRLTT ADLATVEQLG LRVVYDLRTE AEIERAPSLL PGGVRCERLA IGGSAARTRE LTDLVVAGRL AEVPPDFLTR VYDAMAETGA PTFGRLLTGL AEPDATPALF HCTAGKDRTG VAAALLLSLL GVDEAVILDD FELSAVHYTD PKMARLRRRL DGTDVDVERY RAVFGAPREA LGTLLAALTE RHGSVQGYLE EAAGTAPDLP ERLRAQLVEP LGQG
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