| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3843 |
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| Symbol | gabD1 |
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| ID | 5672206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4565508 |
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| End bp | 4566884 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242721 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001508141 |
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| Protein GI | 158315633 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.799079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCC AGTCGGTCAA TCCGGCGACG GGCGCAGTGG TCAGGACGTT CGACGCGCTC
GACGGTGACG AGATCGAACA GCGGCTGGCC CTGGCCAGCG CGACGGCCGC CGTCTACCGC
CGGACGACCT TCGCTGAACG GGCCGCGCTG CTGCGGCGGG CCGCCGACAT TCTCGACGCG
GAACGGCACG AGATCGCCGT GACGATGACG ACCGAGATGG GCAAGACGCT GCGCTCGGCC
GAGGCCGAGG CGGCGAAGTG CGCGAAGGGC ATGCGGTTCT ATGCCGAGCA CGCGGAGGCG
TTCCTCGCCG ACGAGACGCT GGCCGACCCG GGCTCGGTCG GCGCGAGCCG GGCGTTCGGC
CGGTACCAGC CGCTCGGCGT CGTCCTCGCG GTGATGCCGT GGAACTTCCC GCTCTGGCAG
GTCGTCCGGT TCGCGGCGCC GGCGCTGATG GCGGGCAACG TCGGGCTGCT CAAGCATGCC
TCGAACGTCC CGCAGTGCGC GCTCTACCTG GAGGACCTGT TCCGCCGGGC CGGGTTCCCC
GAAGGCGCCT TCCAGACCCT GCTGATCGGC GCCGGGCAGG TCGAGGCGGT GCTGCGCGAC
CCCCGCGTCG CCGCGGCGAC CGTCACGGGC AGCGAACCGG CCGGCCAGGC CGTCGCGTCC
GTGTGCGGGC AGGAGATAAA GAAGACCGTC CTCGAGCTCG GCGGCAGCGA CCCGTTCGTC
GTCATGCCCT CCGCCGACGT CGCGCGCGCC GCCGAGGTGG CGGTCACCGC CCGCTGCCAG
AACAACGGGC AGTCCTGCAT CGCCGCGAAG CGCTTCATCG TCCACGAGGA CGTCTACGAG
CAGTTCGCCG AGCTGTTCGC CGCCGGGATG GCGGCCCTGA AGGTCGGTGA CCCGATGGAC
CCGAGCACCG ACGTCGGCCC GCTGGCGACC GAGGGCGGCC GGCTCGACAT CGAGGAGCTC
CTCGCGGACG CGGTGAAGGA GGGCGCCAGC ATCCTGTGCG GCGGGACGGC GCCGTCCGGG
TCGGGGTACT TCTTCCCACC GACCGTCGTC GGTGACGTGA CTCCGGCGAT GCGCCTGCAC
CTCGAGGAGG CGTTCGGCCC GCTGGCCACC CTCTACCGGG TGCCGGACAT CGACGCGGCG
ATCGAGCTGG CGAACGTGAC GTCGTTCGGG CTCGGCTCCA ACGCGTGGAC GACCGACCCG
GCCGAGCAGG AGCGGTTCAT CTCCGACCTG GTCGCCGGCG CGGTCTTCCT CAACGGCATG
GTCAGCTCCC ATCCGGAGCT GCCGTTCGGC GGCGTCCGCC GCTCCGGCTA CGGCCGTGAG
CTGAGCGCGG TCGGCATCCG GGAGTTCTGC AACCTCAAGA CCGTCTGGGC CGGCTGA
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| Protein sequence | MAIQSVNPAT GAVVRTFDAL DGDEIEQRLA LASATAAVYR RTTFAERAAL LRRAADILDA
ERHEIAVTMT TEMGKTLRSA EAEAAKCAKG MRFYAEHAEA FLADETLADP GSVGASRAFG
RYQPLGVVLA VMPWNFPLWQ VVRFAAPALM AGNVGLLKHA SNVPQCALYL EDLFRRAGFP
EGAFQTLLIG AGQVEAVLRD PRVAAATVTG SEPAGQAVAS VCGQEIKKTV LELGGSDPFV
VMPSADVARA AEVAVTARCQ NNGQSCIAAK RFIVHEDVYE QFAELFAAGM AALKVGDPMD
PSTDVGPLAT EGGRLDIEEL LADAVKEGAS ILCGGTAPSG SGYFFPPTVV GDVTPAMRLH
LEEAFGPLAT LYRVPDIDAA IELANVTSFG LGSNAWTTDP AEQERFISDL VAGAVFLNGM
VSSHPELPFG GVRRSGYGRE LSAVGIREFC NLKTVWAG
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