| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3842 |
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| Symbol | |
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| ID | 5672205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4564397 |
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| End bp | 4565212 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242720 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508140 |
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| Protein GI | 158315632 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.498854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCG GGCTGGACGG CCGCACAGCG GTGGTCACGG GCGGGAACGC CAACATCGGA
CGGGGTATCG CCCTCGCCTT CGCGGCCGAG CGGGCGAACG TCGTCATCGT CGGCCGGGAT
GAGGAGCAGG GTCGTCGGGT GTGCGAGCAG CTGCTGGCCG CCGGCGCGGG GAACGCGCTG
TGGCAGGCCG CCGACGTCAC CGACCGCGCA CAGGTGGTCG CCATGGTGGC TGCCGTGCGG
GAGCGGTTGG GCGGCGTCGA CGTGCTGGTG AACAACGTCG GCGGCAATGT CGACCTCGAC
GCGTTCGCCG ACTCGGACCC GGCGACGTGG GAGCGGGACA TCTCGCTCAA CATCATGAGC
ACCCTGAACT GCACCCATGC GGTGCTTCCC GGGATGATCG AGCGGGGGAG CGGGCGGATC
ATCAACATTG GCTCGACGTC GGGGATCGTC GGCGACCCGC TGCTCGCCGT CTACTCGGCG
ATGAAGGGCG CGGTGCACAG CTTCACCAGG GTGCTGGCCA AGGAGGTCGG CCGGCAGGGC
ATCACCGTCA ACGCGATCGC GCCCTACGGG ACCCTCCCCG AGGACATGAG CCGGGACGTC
AGCTCGGGCA GCCGCTGGCA TCCGGACGGG GTGTTCGCCC GGCTGGCCGC CACCCGGGGC
CCGGAGCTGC ACTCCATCGG CCGGCGCACG GTGCTGGAGC GTCAGACCGC CCTGCCCGCC
GAGATCGGTG CCGCCGCCGT CTATCTGGCC TCGGACGCCG CCGCGTTCGT CACCGGGCAG
GTGTTGTCGG TGGACGGCGG CACCCAGATC GCCTGA
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| Protein sequence | METGLDGRTA VVTGGNANIG RGIALAFAAE RANVVIVGRD EEQGRRVCEQ LLAAGAGNAL
WQAADVTDRA QVVAMVAAVR ERLGGVDVLV NNVGGNVDLD AFADSDPATW ERDISLNIMS
TLNCTHAVLP GMIERGSGRI INIGSTSGIV GDPLLAVYSA MKGAVHSFTR VLAKEVGRQG
ITVNAIAPYG TLPEDMSRDV SSGSRWHPDG VFARLAATRG PELHSIGRRT VLERQTALPA
EIGAAAVYLA SDAAAFVTGQ VLSVDGGTQI A
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