Gene Franean1_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3825 
Symbol 
ID5672189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4542661 
End bp4544781 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content74% 
IMG OID641242704 
Producthypothetical protein 
Protein accessionYP_001508124 
Protein GI158315616 
COG category 
COG ID 
TIGRFAM ID[TIGR02243] conserved hypothetical protein, phage tail-like region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0425607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGC CGGCACCGAA CCTCGACGAC CGGACCTTCC AGCAGCTCGT CGACGACGCG 
AAGCGCTTCA TCGCCGACCG CTGCCCGACG TGGACCAACC ACAACGTGAG CGATCCCGGC
GTGACCCTCG TCGAGACCTT CGCCTGGATG ACCGACCTGC TGCTGTACCG GCTGAACCGG
GTGCCCGACC GGAACTACGT CCGGTTCCTG GACCTGGTCG GGGTGCGGCT GTTCCCGCCG
GTCGCCGCCC GCGCCGAGGT CTCGTTCCGC CTCTCCGCCC AGCAGGACGC CACCGTCCGC
ATCGCGAAGG GCACTGTGGT GTCCACCCGG CGGACCGCCA CCGAACGGGC GATCGAGTTC
ACCACCATGG CGGACCTGGA CATCGTGCCG GCACGCTCGG TCGTGGTGGC GTCCAGCGTG
GACGGCGAGA CCCTGCGCGA CCACACCCGG GAGCTCGGAT TCGGCTCGGG GTTCGCCTGC
TTCGACGAGC GTCCCAAGGC CGGCGACGCG CTCTACATCG GCTTCGACCG GCCGGCCCCG
TCGCTGATCG TCCTCCTGCG GTTCACCTGC ATGGTGAGCG GGCACGGCAT CGACCCGCTG
CGGCCGCCGC TGCGCTGGGA GGCCTGGGAC GGCCGGCGCT GGAGCCGATG CTCGCTCGAA
CAGGACACCA CGAACGGCCT GAACACCACG GGTGTGATCG AGCTGCACCT GCCGCGCACG
CACGGCGTCC GGGACGTGGG CGGCGTCACC TCCGCCTGGC TGCGCTGCCG GGTCGTCGAG
CGGCGGGGGG TGCCGGCCTA CCGGGAATCC CCGCGCATCG TGTCCGTCGT CGGGGCGGCC
GTCGGCGGGG ACGTCGACGC GGTGCACGGC GCTCAGGTCG CCGGGGCGGT CCTCGGGATT
TCGGAGGGGG TTGCCGGGCA GACGTTCCGG CTCAGCCAGG TCCCGGTTCC GACAACCTCC
GAGCCGATCG TGATCGAGGT GAGCGCCGAC GACACCCGGC GCAACGCGCT GCCCGCCGGA
CTGCCCCCCG CGTCGCCGGC GGCGCTCCCG ACGACCGCGC CGACCGGGTC GGTGGCGGTG
CCGGCGGGCG ACGGGTCCGC GCCGGACAGC CCGGACGGGA ACGGCAATGG GAGTGGGGCC
GGGGCCGGGA CGGCCGACGG CTGGTCGGTC TGGCAGCTGG TCGACTCGTT CGCGTCCAGC
GGGCCGGACG ACCGGCACGT GATGGTGGAC CCGACCACCG GCGTGGTGGG GTTCGGGCCG
CTCGTCCGGC TCGCGGACGG CTCGGTGCGC CAGTACGGGG CCGTCCCGCC GAAGGGGTCC
GTCGTCCGGG TGCGGCCGTA CCAGACCGGC GGGGGCCGGA TCGGCAACGT CGTCGCCCGC
TCGTTGAACA CGCTGCGCTC CTCCATCCCG TACGTCGCCG CCGTGTACAA CCGGCAGCCG
GCCAGCGGTG GGGTGGACGG GGAGACCATC GAGGAGGCCA AGGTCCGCGG ACCCCTCGCA
CTGCGGCACC GGGACCGTGC GGTCACCGCC GAGGACTTCG AGGTCCTCGC CCGGCAGGCC
GCCCCGGAGA TCGCCCGGGT GCGCTGCGTG GTGGAGGAGT CCGGCCAGGA CGCCGGGGCG
GTCCGGGTGC TCGTCGTGCC CCGGGCGGCC GGCGCCGACG GCCGTCTCGC CCTCACCGAG
CTCGTCGTTC CGGACACCAC CGGCGAGGCC ATCCGGGGGT ACCTCGACGC CCGGCGGGTG
GTCGGCGTGC GGGTCAGCGT GGAGCCGCCG CGCTACGTCG GCGTGACCGT GGTTGCGCGC
CTGCGCTGCG CCGCGACAGC CCACCCGGAC CGGGTGCGGG AGGATGCGCT GACCGCCCTC
TACCGGTTCC TCAACCCCGT CAGCGGCGGA CCGGACGGCA CCGGCTGGCC GTTCGGCCGG
GCCGTGCACG TCGGGGACGT GTTCGGGGTC CTGCAGGCGG TGTCGGGCGT CGCCTACGTC
GACGAGGCGC TGCTGTTCCA GGCGAACCCG GTCACCCGGG AGCGTTTCAG TCGGGTGGAA
CGCCTCGACC TGCCGCCGAC CAGCCTGGTG TTCAGCTTCG AGCACCAGAT CGACGCGGTT
CGCGCCCAGG CGGCCGGATG A
 
Protein sequence
MMLPAPNLDD RTFQQLVDDA KRFIADRCPT WTNHNVSDPG VTLVETFAWM TDLLLYRLNR 
VPDRNYVRFL DLVGVRLFPP VAARAEVSFR LSAQQDATVR IAKGTVVSTR RTATERAIEF
TTMADLDIVP ARSVVVASSV DGETLRDHTR ELGFGSGFAC FDERPKAGDA LYIGFDRPAP
SLIVLLRFTC MVSGHGIDPL RPPLRWEAWD GRRWSRCSLE QDTTNGLNTT GVIELHLPRT
HGVRDVGGVT SAWLRCRVVE RRGVPAYRES PRIVSVVGAA VGGDVDAVHG AQVAGAVLGI
SEGVAGQTFR LSQVPVPTTS EPIVIEVSAD DTRRNALPAG LPPASPAALP TTAPTGSVAV
PAGDGSAPDS PDGNGNGSGA GAGTADGWSV WQLVDSFASS GPDDRHVMVD PTTGVVGFGP
LVRLADGSVR QYGAVPPKGS VVRVRPYQTG GGRIGNVVAR SLNTLRSSIP YVAAVYNRQP
ASGGVDGETI EEAKVRGPLA LRHRDRAVTA EDFEVLARQA APEIARVRCV VEESGQDAGA
VRVLVVPRAA GADGRLALTE LVVPDTTGEA IRGYLDARRV VGVRVSVEPP RYVGVTVVAR
LRCAATAHPD RVREDALTAL YRFLNPVSGG PDGTGWPFGR AVHVGDVFGV LQAVSGVAYV
DEALLFQANP VTRERFSRVE RLDLPPTSLV FSFEHQIDAV RAQAAG