Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3825 |
Symbol | |
ID | 5672189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4542661 |
End bp | 4544781 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641242704 |
Product | hypothetical protein |
Protein accession | YP_001508124 |
Protein GI | 158315616 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.150333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0425607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGC CGGCACCGAA CCTCGACGAC CGGACCTTCC AGCAGCTCGT CGACGACGCG AAGCGCTTCA TCGCCGACCG CTGCCCGACG TGGACCAACC ACAACGTGAG CGATCCCGGC GTGACCCTCG TCGAGACCTT CGCCTGGATG ACCGACCTGC TGCTGTACCG GCTGAACCGG GTGCCCGACC GGAACTACGT CCGGTTCCTG GACCTGGTCG GGGTGCGGCT GTTCCCGCCG GTCGCCGCCC GCGCCGAGGT CTCGTTCCGC CTCTCCGCCC AGCAGGACGC CACCGTCCGC ATCGCGAAGG GCACTGTGGT GTCCACCCGG CGGACCGCCA CCGAACGGGC GATCGAGTTC ACCACCATGG CGGACCTGGA CATCGTGCCG GCACGCTCGG TCGTGGTGGC GTCCAGCGTG GACGGCGAGA CCCTGCGCGA CCACACCCGG GAGCTCGGAT TCGGCTCGGG GTTCGCCTGC TTCGACGAGC GTCCCAAGGC CGGCGACGCG CTCTACATCG GCTTCGACCG GCCGGCCCCG TCGCTGATCG TCCTCCTGCG GTTCACCTGC ATGGTGAGCG GGCACGGCAT CGACCCGCTG CGGCCGCCGC TGCGCTGGGA GGCCTGGGAC GGCCGGCGCT GGAGCCGATG CTCGCTCGAA CAGGACACCA CGAACGGCCT GAACACCACG GGTGTGATCG AGCTGCACCT GCCGCGCACG CACGGCGTCC GGGACGTGGG CGGCGTCACC TCCGCCTGGC TGCGCTGCCG GGTCGTCGAG CGGCGGGGGG TGCCGGCCTA CCGGGAATCC CCGCGCATCG TGTCCGTCGT CGGGGCGGCC GTCGGCGGGG ACGTCGACGC GGTGCACGGC GCTCAGGTCG CCGGGGCGGT CCTCGGGATT TCGGAGGGGG TTGCCGGGCA GACGTTCCGG CTCAGCCAGG TCCCGGTTCC GACAACCTCC GAGCCGATCG TGATCGAGGT GAGCGCCGAC GACACCCGGC GCAACGCGCT GCCCGCCGGA CTGCCCCCCG CGTCGCCGGC GGCGCTCCCG ACGACCGCGC CGACCGGGTC GGTGGCGGTG CCGGCGGGCG ACGGGTCCGC GCCGGACAGC CCGGACGGGA ACGGCAATGG GAGTGGGGCC GGGGCCGGGA CGGCCGACGG CTGGTCGGTC TGGCAGCTGG TCGACTCGTT CGCGTCCAGC GGGCCGGACG ACCGGCACGT GATGGTGGAC CCGACCACCG GCGTGGTGGG GTTCGGGCCG CTCGTCCGGC TCGCGGACGG CTCGGTGCGC CAGTACGGGG CCGTCCCGCC GAAGGGGTCC GTCGTCCGGG TGCGGCCGTA CCAGACCGGC GGGGGCCGGA TCGGCAACGT CGTCGCCCGC TCGTTGAACA CGCTGCGCTC CTCCATCCCG TACGTCGCCG CCGTGTACAA CCGGCAGCCG GCCAGCGGTG GGGTGGACGG GGAGACCATC GAGGAGGCCA AGGTCCGCGG ACCCCTCGCA CTGCGGCACC GGGACCGTGC GGTCACCGCC GAGGACTTCG AGGTCCTCGC CCGGCAGGCC GCCCCGGAGA TCGCCCGGGT GCGCTGCGTG GTGGAGGAGT CCGGCCAGGA CGCCGGGGCG GTCCGGGTGC TCGTCGTGCC CCGGGCGGCC GGCGCCGACG GCCGTCTCGC CCTCACCGAG CTCGTCGTTC CGGACACCAC CGGCGAGGCC ATCCGGGGGT ACCTCGACGC CCGGCGGGTG GTCGGCGTGC GGGTCAGCGT GGAGCCGCCG CGCTACGTCG GCGTGACCGT GGTTGCGCGC CTGCGCTGCG CCGCGACAGC CCACCCGGAC CGGGTGCGGG AGGATGCGCT GACCGCCCTC TACCGGTTCC TCAACCCCGT CAGCGGCGGA CCGGACGGCA CCGGCTGGCC GTTCGGCCGG GCCGTGCACG TCGGGGACGT GTTCGGGGTC CTGCAGGCGG TGTCGGGCGT CGCCTACGTC GACGAGGCGC TGCTGTTCCA GGCGAACCCG GTCACCCGGG AGCGTTTCAG TCGGGTGGAA CGCCTCGACC TGCCGCCGAC CAGCCTGGTG TTCAGCTTCG AGCACCAGAT CGACGCGGTT CGCGCCCAGG CGGCCGGATG A
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Protein sequence | MMLPAPNLDD RTFQQLVDDA KRFIADRCPT WTNHNVSDPG VTLVETFAWM TDLLLYRLNR VPDRNYVRFL DLVGVRLFPP VAARAEVSFR LSAQQDATVR IAKGTVVSTR RTATERAIEF TTMADLDIVP ARSVVVASSV DGETLRDHTR ELGFGSGFAC FDERPKAGDA LYIGFDRPAP SLIVLLRFTC MVSGHGIDPL RPPLRWEAWD GRRWSRCSLE QDTTNGLNTT GVIELHLPRT HGVRDVGGVT SAWLRCRVVE RRGVPAYRES PRIVSVVGAA VGGDVDAVHG AQVAGAVLGI SEGVAGQTFR LSQVPVPTTS EPIVIEVSAD DTRRNALPAG LPPASPAALP TTAPTGSVAV PAGDGSAPDS PDGNGNGSGA GAGTADGWSV WQLVDSFASS GPDDRHVMVD PTTGVVGFGP LVRLADGSVR QYGAVPPKGS VVRVRPYQTG GGRIGNVVAR SLNTLRSSIP YVAAVYNRQP ASGGVDGETI EEAKVRGPLA LRHRDRAVTA EDFEVLARQA APEIARVRCV VEESGQDAGA VRVLVVPRAA GADGRLALTE LVVPDTTGEA IRGYLDARRV VGVRVSVEPP RYVGVTVVAR LRCAATAHPD RVREDALTAL YRFLNPVSGG PDGTGWPFGR AVHVGDVFGV LQAVSGVAYV DEALLFQANP VTRERFSRVE RLDLPPTSLV FSFEHQIDAV RAQAAG
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