Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3813 |
Symbol | |
ID | 5672177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4530045 |
End bp | 4530719 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641242692 |
Product | hypothetical protein |
Protein accession | YP_001508112 |
Protein GI | 158315604 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.36363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.356444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACG AAACACTGGA CGGCGGGCCG ATCCCGGGGA TGCGGCGGCG GAACGAGGTC GAGCGGCGGC CGGAGCCTCG TCCCGCCGAG CAGGTCCTGC CGTCGATGGT GGGCAACGCG GCCTTCGGCC GGTTGGTACG CGACATCCGG GCGGGCGCGG TGCTCGGCGG GCCACCGGGA CCGGCGGCCG CCGGTTCGGC GACCGGTCGG GTGGCGCTGC TGCGCAGTGC GTTGCGGTCC CAGGGCGCTG GCCCGCTGGA TCCGGAGATC GGCGATGCGA TCGAGGCACG GCGAGGCGCC GGGTCGCTGT TGCCGGAGCC GGTGCGGGCC GAGATGGAAG GGCATGTGGG GGTCGACCTG TCGGCGGTGC GGGTGCACAC CGACAGTGCG GCGGCGACGT TGAACCGGGC GGTGCAGGCG GAGGCGTTCA CCACCGGTAC GGACGTGTTC TTCGCGCCGG GGCGGTTCGA CCCGTCGTCC TCGGCCGGCA GGGGGTTGTT GGCGCACGAG CTGACGCACG TGGTGCAGCA GTCAACCGGC GCCGGGGGCC CGGGCGGGAC GGTCAGCCAT CCGGACGACC CGGCCGAGCT GGAGGCCGCC GCGGTCGGCG AGCACGTCGC CCGCCAGACG ACGCCGATGC CGGACGAGGA GGAGGAAGCC CCGACGGGCA CCTGA
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Protein sequence | MEHETLDGGP IPGMRRRNEV ERRPEPRPAE QVLPSMVGNA AFGRLVRDIR AGAVLGGPPG PAAAGSATGR VALLRSALRS QGAGPLDPEI GDAIEARRGA GSLLPEPVRA EMEGHVGVDL SAVRVHTDSA AATLNRAVQA EAFTTGTDVF FAPGRFDPSS SAGRGLLAHE LTHVVQQSTG AGGPGGTVSH PDDPAELEAA AVGEHVARQT TPMPDEEEEA PTGT
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