Gene Franean1_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3813 
Symbol 
ID5672177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4530045 
End bp4530719 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content75% 
IMG OID641242692 
Producthypothetical protein 
Protein accessionYP_001508112 
Protein GI158315604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.36363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.356444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACG AAACACTGGA CGGCGGGCCG ATCCCGGGGA TGCGGCGGCG GAACGAGGTC 
GAGCGGCGGC CGGAGCCTCG TCCCGCCGAG CAGGTCCTGC CGTCGATGGT GGGCAACGCG
GCCTTCGGCC GGTTGGTACG CGACATCCGG GCGGGCGCGG TGCTCGGCGG GCCACCGGGA
CCGGCGGCCG CCGGTTCGGC GACCGGTCGG GTGGCGCTGC TGCGCAGTGC GTTGCGGTCC
CAGGGCGCTG GCCCGCTGGA TCCGGAGATC GGCGATGCGA TCGAGGCACG GCGAGGCGCC
GGGTCGCTGT TGCCGGAGCC GGTGCGGGCC GAGATGGAAG GGCATGTGGG GGTCGACCTG
TCGGCGGTGC GGGTGCACAC CGACAGTGCG GCGGCGACGT TGAACCGGGC GGTGCAGGCG
GAGGCGTTCA CCACCGGTAC GGACGTGTTC TTCGCGCCGG GGCGGTTCGA CCCGTCGTCC
TCGGCCGGCA GGGGGTTGTT GGCGCACGAG CTGACGCACG TGGTGCAGCA GTCAACCGGC
GCCGGGGGCC CGGGCGGGAC GGTCAGCCAT CCGGACGACC CGGCCGAGCT GGAGGCCGCC
GCGGTCGGCG AGCACGTCGC CCGCCAGACG ACGCCGATGC CGGACGAGGA GGAGGAAGCC
CCGACGGGCA CCTGA
 
Protein sequence
MEHETLDGGP IPGMRRRNEV ERRPEPRPAE QVLPSMVGNA AFGRLVRDIR AGAVLGGPPG 
PAAAGSATGR VALLRSALRS QGAGPLDPEI GDAIEARRGA GSLLPEPVRA EMEGHVGVDL
SAVRVHTDSA AATLNRAVQA EAFTTGTDVF FAPGRFDPSS SAGRGLLAHE LTHVVQQSTG
AGGPGGTVSH PDDPAELEAA AVGEHVARQT TPMPDEEEEA PTGT