| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3788 |
|---|
| Symbol | |
|---|
| ID | 5672152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4491621 |
|---|
| End bp | 4492559 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 641242667 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001508087 |
|---|
| Protein GI | 158315579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCC ATCCGCCGCC GGGCTTGTTC GCCGGGCTGG TCGACGACGC CGGGCTGTTC
CCGCCCGAGG AACTGCCCAT GCCCGCCGCC CTCCGCCGGC ACCGGCACGA CCGCGCGGAC
CCCACCGGCG TCCTGACCGG CCACTTCCTG TGCGCCGCGT CCCGCGTCGA CGAACTCCTC
GAAGCGCTCG CCGCCGGTGC GCGCGGGTGT GGAGCCTCCA GCGGGCGTCT CGACGGGACC
GCCGCCGAGG GGCGCCTCGA CGGGGCGGCC GCCGAGGGGC GTCTCGCGCT GGGCCTCATC
AGCCCGTTGG AGCCGAGCAC GCTCCACACC GCCCTGGCCC GCCTTGAGGG CGACCCGCGC
GTCGAGCTGG TCGGGGTCGA GGGGCCGCTG GGTGACCTTG CCGCGCTGAC GGCGGTGCCG
CCGTCCGTGC CCTGTTTCGT CGAGACGCCG CGCGGGGATC TCGACGCCCT GGCGCGGGTG
TCGGCCGCCG GCCACGGGGC CAAGATCCGG TGCGGCGGGG CGCGCGCGGA ACAGTTCCCC
CCGTCCGCGG AAGTGGCCCG GTTCGTGGTC GCCTGCGCGC GCGGCGGCGT GCCGTTCAAG
GCGACCGCCG GGCTCCACCA CGCGCTGCCC CACCAGGACC GGCGAACCGG CTTCACCCAC
CACGGCTTCC TCAACCTGGT GCTCGCCACC TGCCGCGCGG TCGACGGCGC CGACCTCCCG
GCGGTCAGCG AGATCCTCGA CCGCACGGAC GAGGCCGCGC TCGTCGCCGA GGCCCGCGCG
GTGCCGCCGG AGCTGGTCCG CGCCGCACGC CGGGCCCTCG TCGCATACGG CTCGTGCCGG
ACAGACGCAC CGGTCGACGA CCTGCGCCGA CTCGGCCTCG TCAGCCCCGC GGCACCGTCC
GGGGTTGCGG CGTCGGCCGG GACCGAGGCG TCGGCGTGA
|
|---|
| Protein sequence | MTGHPPPGLF AGLVDDAGLF PPEELPMPAA LRRHRHDRAD PTGVLTGHFL CAASRVDELL
EALAAGARGC GASSGRLDGT AAEGRLDGAA AEGRLALGLI SPLEPSTLHT ALARLEGDPR
VELVGVEGPL GDLAALTAVP PSVPCFVETP RGDLDALARV SAAGHGAKIR CGGARAEQFP
PSAEVARFVV ACARGGVPFK ATAGLHHALP HQDRRTGFTH HGFLNLVLAT CRAVDGADLP
AVSEILDRTD EAALVAEARA VPPELVRAAR RALVAYGSCR TDAPVDDLRR LGLVSPAAPS
GVAASAGTEA SA
|
|---|
| |