| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3787 |
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| Symbol | |
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| ID | 5672151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4490401 |
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| End bp | 4491624 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242666 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_001508086 |
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| Protein GI | 158315578 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTACT ACGCCCGGAC CGGGGACGTC CCGCCCAAAC GGCACACGCA GCACCGCGAC
GGCGACGGTG GCCTGTACAG CGAGGAGCTG ATGGGATCGG AGGGCTTCTC CGCGGACTCG
TCACTGCTGT ACCACCGGGA GATCCCGGCG GCGATCAGCG CGGCCCGGCC GTGGGAGCTG
CCCGCCCTCG GCACCGTCGC CAACCACCCG CTGCGGCCGC GGCACCTGCG CACCCACACC
CTCACCGCGG CCGAGGGATG GCGGAGCCTC GACGTCGTCA CCGGGCGGCG GCTGCTCCTG
GGCAACACCG ATGTCCGGCT CTGCTACGTC GCCGCCGGCG CGCCTTCACC GCTCTACCGC
AACGGCACCG GTGACGAGTG CGTCTACGTC GAGGCCGGCA CCGCCCGCGT CGACACCGTG
TTCGGCACAC TGCCGGCCGG CCCCGGCGAC TACGTCGTCG TCCCGTGCGG CACGACGCAT
CGGTGGACGC CGAGCGGCGA CGAGCCGCTG CGCGCCTACA TCATCGAGGC GAACAGCCAC
ATCCGCCCGC CGAAGCGCTA CCTGTCAGCC TCGGGCCAGT TCCTCGAGCA CGCCCCCTAC
TGCGAACGCG ACCTGCGTCG CCCGGCCGGG CCGCTGCTCG AGGAGGGAAC GGACGTCGAG
GTGTACGTGA AGCACCGCGG GCCCGGGGCC GGGACCGGCG GCGTCGCCGG CACGGTGCTG
ACCTACCGGA CCCACCCGTT CGATGTCGTC GGCTGGGACG GCTGCCTCTA CCCGTACCTG
TTCAACATCG GCGACTTCGA GCCGATCACC GGCCGGCTGC ACCAGCCACC GCCGGTGCAC
CAGGTCTTCG AGGGCCGTAA CTTCGTCGTC TGCAACTTCG TGCCCCGCAA GGTCGACTAC
CACCCCGACG CGATCCCGAC GCCGTACTAC CACGCCAACA TCGACTCCGA CGAAGTGATC
TTCTACACCG GCGGTGCCTA CGGAGCTCGC CGCGGCTCCG GGATCGGGCC CGGCTCCGTC
TCGCTGCATC CCGCCGGGCA CACCCACGGC CCGCAGCCCG GGGCGGTGCA GGCGAGCATC
GGGGTGGAGT TCGTCGACGA GCTCGCGGTC ATGGTCGACA CCTTCGCCCC GCTGGAACTC
GGCGAGGGCG GGCTTGCCTG CGAGGACCCC GACTACGCCT GGACGTGGGC GGCGCACGCG
GCGGCGCGGG GCGGCGCAGG GTGA
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| Protein sequence | MPYYARTGDV PPKRHTQHRD GDGGLYSEEL MGSEGFSADS SLLYHREIPA AISAARPWEL
PALGTVANHP LRPRHLRTHT LTAAEGWRSL DVVTGRRLLL GNTDVRLCYV AAGAPSPLYR
NGTGDECVYV EAGTARVDTV FGTLPAGPGD YVVVPCGTTH RWTPSGDEPL RAYIIEANSH
IRPPKRYLSA SGQFLEHAPY CERDLRRPAG PLLEEGTDVE VYVKHRGPGA GTGGVAGTVL
TYRTHPFDVV GWDGCLYPYL FNIGDFEPIT GRLHQPPPVH QVFEGRNFVV CNFVPRKVDY
HPDAIPTPYY HANIDSDEVI FYTGGAYGAR RGSGIGPGSV SLHPAGHTHG PQPGAVQASI
GVEFVDELAV MVDTFAPLEL GEGGLACEDP DYAWTWAAHA AARGGAG
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