| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3785 |
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| Symbol | |
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| ID | 5672149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4488139 |
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| End bp | 4488996 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641242664 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001508084 |
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| Protein GI | 158315576 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.48754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCT CCGGGCTCGC CGACTTCCTG CGCCGGCGCC GCGCGCAGCT GCAGCCATCG
GACGTCGGCC TGCCCCCCGG GGTGCGCCGG CGCACCCCGG GGCTGCGCCG CGACGAGGTG
GCTGCGCTCG CCGTCATGTC GACCGACTAC TACACCCGCC TCGAGCAGTC CCGCGGGCCG
CGGCCGTCCG CGCCGCTGCT GGCCGCGCTG GCCCGGGCAC TGCGCCTGCG CGACGACGAA
CGCGACCACC TGTTCCACCT CGCGGGCCAG CCGCCCCCGC CGCAGACGTC CACCGCCGCG
CATGTATCGC CCGGTCTGCT GTACATCCTC GACCGGCTCA CCGACACTCC CGCGTTCGTC
GTCTCCGACA TCGGCGAGGT CCTGGCGCGC AACCGCATGT CGGTCGCGCT GTCCGGCGAC
ATCTCCGCCC GCGCGGGACG GGCCCGTAAC AACACCTGGC TCTGGTTCGC CGAGCCGGAC
GTCCGGTCGC GGTTCCCGCG CGAGGACTGG GAGCGGCTGT CCCGCACGCA CGTCGCGGAC
CTGCGCGCCA CCCACGGCCG GCGCCGCGGC GACGCGGATG TGGAGGATCT CGTGGCTGAC
CTGCTGGGCC GCAGCGAGGA GTTCGCGCGG CTCTGGGCGG AGCACGAGGT CATGGTGCGC
CGCGCCGACC ACAAGCGGAT CATCCATCCG GCGGTGGGCA CCGTGGACCT GCTGTGCGAG
ACGCTGACCG GCGACGCGGG CACCCAGACG CTCGTCGTCC TCTACCCGGG CCCAGGCAGC
CCGGCGCGCG ACCAGCTCGA CCTGCTGCGG GTCATCGGAA CCCAGGATCT GACCGCCGGC
GAGGTCACCG GCCGCTGA
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| Protein sequence | MDRSGLADFL RRRRAQLQPS DVGLPPGVRR RTPGLRRDEV AALAVMSTDY YTRLEQSRGP
RPSAPLLAAL ARALRLRDDE RDHLFHLAGQ PPPPQTSTAA HVSPGLLYIL DRLTDTPAFV
VSDIGEVLAR NRMSVALSGD ISARAGRARN NTWLWFAEPD VRSRFPREDW ERLSRTHVAD
LRATHGRRRG DADVEDLVAD LLGRSEEFAR LWAEHEVMVR RADHKRIIHP AVGTVDLLCE
TLTGDAGTQT LVVLYPGPGS PARDQLDLLR VIGTQDLTAG EVTGR
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