Gene Franean1_3766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3766 
Symbol 
ID5672131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4464507 
End bp4465886 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content74% 
IMG OID641242647 
Productphosphoribosyltransferase 
Protein accessionYP_001508067 
Protein GI158315559 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG0412] Dienelactone hydrolase and related enzymes
[COG1926] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTTCC GTGATCGCAT GGACGCGGGC CGGCAGCTCG GCCGGAGGCT GGCGCATCTT 
CGTGGGCTGG ACGTCGTGGT TGTCGGGCTC ATTCGCGGCG GGATTCCGGT CGCCTACCAG
GTCGCGCGGA CGCTGGGCGC CCCGCTGGAC GTCATCCTGG TCCGCAAGCT CGGCGTCCCC
TTCCAGCCGG AGCTCGCGAT GGGCGCAATC GCCGAAGGGG ACGTTCGGGT CATCAACCCC
GAGACGCGGC TGATGGCCGA CATCGGCCCG GACGAGCTGG CCGCGGTCGA AGCCCGCGAG
CGGCTGGAGC TGGACCGCCG GATCCGCCGG TTCCGGGGCG CCCGGCCGCG TGTTCCACTG
GCCGGTCGCA CCGTGGTCGT GGTGGACGAC GGGATCGCCA CCGGGGCGAC GGCGTCCGCC
GCCTGCCAGG CGGCCCGCGC CGCCGGCGCC ACCCGGATCG TGTTGGCGGC TCCCGTCGCA
CCGCCGGACC GGATCGGATG GCTGCGCCGG GACGCCGACG AGGTCGTGTG CCTGCACACT
CCGGACCGGT TCTTCGCCAT CGGCACGTTC TACACCGACT TCACCCAGAC GTCCGACGAC
GAGGTGACGG ACCTGCTGCG CAGGGCGGCG GTCCTGGCAC CGCAGGCACC TACGGCCGCA
CCGGCCGAGA CGCACGGGAC GCACGGGACG CACGGAGCGG CCACGCCGGG CGCGACGCCC
AACCCGCCGG GGCGCGAGGT CGAGGTCGAC ATCCCTGCCG TCCCGGTCCG GCTGACCGGG
CAGCTCACGG TTCCGGAGAG GGCCGGCGGT CTGGTCGTGT TCGCCCACGG CAGCGGCAGC
AGCCGACACA GTCCCCGTAA CCGGTACGTG GCCGACGTCC TGGGCACCGC CGGGCTCGCC
ACCCTGCTGT TCGACCTGCT CACCCCCGCC GAGGAGATCG ACCGGGCCAA CGTGTTCGAC
ATCGGGCTGC TCGCCCACCG CCTGGTGGAC GTCACCGGCT GGCTGCGCGG CCAGCCGGGC
GTGTCGCACC TCCCGGTCGG CTACTTCGGG GCCAGTACCG GAGCCGCCGC CGCGCTGTGG
GCCGCCGCCG AACCCGGCTC CCGCATCGCC GCCGTCGTCT CCCGCGGCGG CCGGCCGGAC
CTGGCCGCCT CGAAACTGGC CGCGGTGGCG GCCCCGACCC TGCTCGTCGT GGGCGAGCAC
GATGACCTCG TCATCGACCT CAACCGGCAG GCCCAGGCCC GGCTGCGGTG CGAGAACCGG
CTCACGGTGG TCCCGCAGGC CACCCACCTG TTCGCCGAGC CCGGCGCGCT GGAGACGGTG
GCCGCGCTCG CCCGTGACTG GTTCGTCCAC CACATGACCC TGGTCTCGCA CCGCGGCTGA
 
Protein sequence
MLFRDRMDAG RQLGRRLAHL RGLDVVVVGL IRGGIPVAYQ VARTLGAPLD VILVRKLGVP 
FQPELAMGAI AEGDVRVINP ETRLMADIGP DELAAVEARE RLELDRRIRR FRGARPRVPL
AGRTVVVVDD GIATGATASA ACQAARAAGA TRIVLAAPVA PPDRIGWLRR DADEVVCLHT
PDRFFAIGTF YTDFTQTSDD EVTDLLRRAA VLAPQAPTAA PAETHGTHGT HGAATPGATP
NPPGREVEVD IPAVPVRLTG QLTVPERAGG LVVFAHGSGS SRHSPRNRYV ADVLGTAGLA
TLLFDLLTPA EEIDRANVFD IGLLAHRLVD VTGWLRGQPG VSHLPVGYFG ASTGAAAALW
AAAEPGSRIA AVVSRGGRPD LAASKLAAVA APTLLVVGEH DDLVIDLNRQ AQARLRCENR
LTVVPQATHL FAEPGALETV AALARDWFVH HMTLVSHRG