| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3760 |
|---|
| Symbol | |
|---|
| ID | 5672125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4455460 |
|---|
| End bp | 4456233 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641242641 |
|---|
| Product | protein tyrosine/serine phosphatase |
|---|
| Protein accession | YP_001508061 |
|---|
| Protein GI | 158315553 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.068638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCT CGCAGGAAGT GCCTCAGTGG ATAGAGCTCA CCGGCGCGCA CAACGTCCGG
GATCTCGGAG GGTTACCCGC GGCCGGGGGC ACCGTCCGCC CCGGTGTGCT GCTCCGAGGT
GACAACCTCG ACAGTCTGAC CATCGAAGAC ATCGCGCTGC TGCGGGACAG GGTGGGCCTG
CGCGGCGTCG TGGACCTGCG CGCCCCGTTC GAGAACCCGC GGGCCGCCGA GTGGTTCCCG
CAGCTGGGCA TCACCTGGAT GCACGAGCCG CTGATGGACT TCACCGGGCT CAGCGACCCG
AAGGCGCTGC GGGACCGGAT CGGCGGCGAC TACGCCCGGT TTTACGCGAT CATGCTCGAG
AACGCCGGCC CGGGGCTGGT CCGCATCCTG GACTTCCTCG TCTCCGGTGA CCGCACCCCG
GCGCTGGTGC ACTGCGCCGC GGGCAAGGAC CGCACCGGCA TCACGACGGC CGTCCTGCTC
GCCGCCGCCG GTGTCGAGCG CGACGCGATC GTCGCGGACT ACCTTGCCAC CGAACAGCGG
ATCGAGCGGG TTCGGGAGGC ACTGAGCCGG CGGCCGGAGT ACAGCCACCT GAGCGCGGGC
CGATCGGCGC CGCGCGGCAT CGGGACCGCG GTTCTCGTCG ACCCGAAGGC CATCGCCAGC
GTGCTCGACA CGATCGACGC CGCCCCCGGC GGCCCGGCCG GGTACCTCGC CGCCAACGGT
GCGACCGCCG AGCAGATCAG CCGCTGGCAG GAAATGATCA TCGAGTCGCG CTGA
|
|---|
| Protein sequence | MTASQEVPQW IELTGAHNVR DLGGLPAAGG TVRPGVLLRG DNLDSLTIED IALLRDRVGL
RGVVDLRAPF ENPRAAEWFP QLGITWMHEP LMDFTGLSDP KALRDRIGGD YARFYAIMLE
NAGPGLVRIL DFLVSGDRTP ALVHCAAGKD RTGITTAVLL AAAGVERDAI VADYLATEQR
IERVREALSR RPEYSHLSAG RSAPRGIGTA VLVDPKAIAS VLDTIDAAPG GPAGYLAANG
ATAEQISRWQ EMIIESR
|
|---|
| |