| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3754 |
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| Symbol | |
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| ID | 5672119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4446453 |
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| End bp | 4447412 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242635 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001508055 |
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| Protein GI | 158315547 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGGT ACGTCCTCGG TCGGTTCGCC CAGGCGCTCG TCGTGCTCTG GGCGGCCTAC
ACCGTGACCT TCGCGGTCCT CTACCTGCTG CCGAGCGATC CGGTCGCCCT GCAACTGGGA
GCGGCGGGGA TCGAGACCGA CAAGCTCACC CCTGAGCAGC TCAACACCGC GATGGCCCAG
TACGGGCTGG ACCGTCCGGT CCTGAATCAG TACTTCTCCC ACCTGTGGGG CTTCCTGCAC
GGAGACTTCG GTGACTCGAT CTCCAAGCAG CAGCCGGTCG CCGACCTCAT CGGCGACCGG
CTGGGCCCCA CGGTCGCGCT GAGCATCACC GCCGCCGCAC TCTCGCTCGT GGCCGGGATG
GCGCTGGCCT ACCTGGCCTC CTACGTGCGG TGGCGGCCGG CCCGGCTGTT CCTGACCCGG
CTGCCCTCGT TCGGGGCCTC GTTCCCCCAG TTCTTCATCG CGCTGCTGCT GATCCAGCTG
CTGTCGTTCA ACCTCGGCTG GCTGCCGGCC ACCGGCATCA AGGGCTGGAA GTCGCTGGTG
ATGCCGTCCA TCACGATCTC GCTGCTGACG GCCTCGATGC TCGCGCAGGT GCTGATGCGC
AGCTTCGACG ACACGCTCCG CCAGCCCTAC ATCGTGACGG CGCGCGCGAA GGGCCTCTCC
CGGGCGGCGG TGCAGTGGCG GCACGGCTTC CGCAACGCGC TGCTGCCCGC CCTGACCATC
CTCGGCGTCC TGGTCGGCCT GACCGTCACC AGCGCGATCG TCGTCGAGAC GGTGTTCTCC
CGCAACGGCC TCGGCAAGCT CGCCCAGGAA GCGGTGCTGG CGCAGGACGT TCCGGTGGTC
CTCGCGATCG TCTCGCTGGC GGCCGCCGTC TTCGTCTTCG TCAACCTCGT GGTCGATCTG
CTCTATCCGT TGCTGGACCC CCGCATCGTG CAGGGCCGGC GGAAGGTGGC CTCATCGTGA
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| Protein sequence | MTRYVLGRFA QALVVLWAAY TVTFAVLYLL PSDPVALQLG AAGIETDKLT PEQLNTAMAQ
YGLDRPVLNQ YFSHLWGFLH GDFGDSISKQ QPVADLIGDR LGPTVALSIT AAALSLVAGM
ALAYLASYVR WRPARLFLTR LPSFGASFPQ FFIALLLIQL LSFNLGWLPA TGIKGWKSLV
MPSITISLLT ASMLAQVLMR SFDDTLRQPY IVTARAKGLS RAAVQWRHGF RNALLPALTI
LGVLVGLTVT SAIVVETVFS RNGLGKLAQE AVLAQDVPVV LAIVSLAAAV FVFVNLVVDL
LYPLLDPRIV QGRRKVASS
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