| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3743 |
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| Symbol | |
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| ID | 5672108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4432148 |
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| End bp | 4433089 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242624 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508044 |
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| Protein GI | 158315536 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00430281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGT CCGGGCGGAT CACCACACCG TTCACGGCCG AGTCGACCGC GGCCGAGGTC
GTGGCCGGCA TCGATCTCGG TGGCCGCCGC GTCGTGGTGA CCGGCGCGTC GTCCGGCATC
GGGGTCGAGA CGGCCCGGGC GCTGGCCGGG GCGGGCGCCG AGGTCACCCT TGCCGTCCGC
GATGTCGAGG CGGGCCGGTG GACCGCCGAC GACATCGTCG CCGCCATGGG CAACAAGGAG
ATCCACGTGG CGCCGTTGGA TCTCGCCGAC CGGGCGTCGG TCGCCGCGTT CGTCGCCGGC
TGGGACGGCC CGCTGCACAT CCTGGTGAAC AACGCCGGTG TGATGGCCAC GCCCGAGCTG
CGCACGCCGG AGGGCTGGGA GCTGCAGTTC GCGACCAACC ACCTCGGTCA TTTCGCGGTG
GCCTCCGGCC TGCGCGGCGC GCTGGCGGCG GCCGGGGGCG CGCGGGTGGT GTCGGTCAGC
TCGAGCGGGC ACCTGCGGTC GCCGGTGGTC TTCTCCGACA TCCACTTCCG TGAGCGCGCC
TACGAGCCGT GGGCGGCGTA CGGCCAGTCC AAGACCGCGA ACGTGCTGTT CGCGGTCGAG
GCGACCAGGC GCTGGGCCGA CGACGGCATC ACCGTGAACG CGCTGATGCC GGGGGCGATC
GCCACCAGGC TGCAGCGCCA CATCAGCACC GAGGATCTCG ACCGGCTCCG TGGCCAGATC
AACGCCCCGG CTCTGGTCTG GAAATCCGTC GAGCAGGGCG CCGCGACCTC GGTGCTGCTC
GCGACCTCGC CGCTGCTGGA CGGGATCGGC GGCCGGTACT TCGAGGACTG CAACGAGGCG
CTCCCGAATA CTCCGGGTGT CCGGGGCGGT GTGGCCGCCT ACGCCCTCGA CCCCGAGGCC
GCGGCCCGGC TCTGGGACGT CACCGTCGAC ACGCTCACCT GA
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| Protein sequence | MATSGRITTP FTAESTAAEV VAGIDLGGRR VVVTGASSGI GVETARALAG AGAEVTLAVR
DVEAGRWTAD DIVAAMGNKE IHVAPLDLAD RASVAAFVAG WDGPLHILVN NAGVMATPEL
RTPEGWELQF ATNHLGHFAV ASGLRGALAA AGGARVVSVS SSGHLRSPVV FSDIHFRERA
YEPWAAYGQS KTANVLFAVE ATRRWADDGI TVNALMPGAI ATRLQRHIST EDLDRLRGQI
NAPALVWKSV EQGAATSVLL ATSPLLDGIG GRYFEDCNEA LPNTPGVRGG VAAYALDPEA
AARLWDVTVD TLT
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