Gene Franean1_3739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3739 
Symbol 
ID5672104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4426413 
End bp4426904 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content72% 
IMG OID641242620 
ProductMarR family transcriptional regulator 
Protein accessionYP_001508040 
Protein GI158315532 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.394554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCGC AGCAGCCGCG CTGGCTGACC GACGAGGAGA TGCAGACCTG GCTGGCCCTG 
GTCAGCGTGC TGATCAGGCT TCCGGCGGCG CTCGACGACC AGCTCCAGCG TGACGCCGGG
CTCAGCCACT TCGAGTACCA GGTGCTGGTG GGGCTGTCCG GGGCGCCCGA GCGCACCCTG
CGGATGAGCA CCCTGGCCGT ATTCGCCAAC GGATCGCTCT CCCGGCTCTC CCACGTGGTC
GGGCGGATGG AGAAGGCGGG CTGGGTGCGC CGCACACCGG ATCCCACCGA TGGCCGCTAC
ACCCTGGCAA TCCTCACGGA TGCGGGCTGG GAGAAAATCG TCGCGACCGC CCCCGGGCAC
GTCGACGCGG TCCGCGCCCT GGTCTTCGAT CCCCTCACCC GCGCGCAGCA GCGGCAGCTG
GGCGACATCG GGCGCCGCAT CGTCCGCGCC GTCGACCCCG ACGGCAGCCA CCTCGACAGG
CTCACCGGCT GA
 
Protein sequence
MDAQQPRWLT DEEMQTWLAL VSVLIRLPAA LDDQLQRDAG LSHFEYQVLV GLSGAPERTL 
RMSTLAVFAN GSLSRLSHVV GRMEKAGWVR RTPDPTDGRY TLAILTDAGW EKIVATAPGH
VDAVRALVFD PLTRAQQRQL GDIGRRIVRA VDPDGSHLDR LTG